Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151100g00025 ATGGGAACTGAAAAGGTTAGGTGTTGCAGCAAATTTGTTGAGAACTCTCAGCACTATTTTGCTATGATTATTTTGCAGTTTGTGTATGCTGGCATGAACATTATCACTAAAGTTTCCCTCAACAAAGGCATGAGCCACTTTGTGCTTGTGGTTTATCGCCAAGTTTTTGCAACTGCTGCCATTGCTCCATTTGCTATCATCTTTGAAAGGAAACATCAACCAAGGATAACATTCCCAATTTTTATACAGATTTTTATCCTAGCTCTACTTGGGCCTGTGATAGATCAAAATTTGTACTATGCTGGGTTGAAATTCACTTCCCCTACCTTCGCATGTGCAATGAGCAACACACTTCCTGCAATGACCTTTGTGATGGCTCTTTTATGCAGGATGGAGAAGATCAACATGAAGAAATTGAGGTGTCAAGCCAAGGTAATAGGCACCATTGTTACAGTAGCTGGGGCCACTGTTATGACCTTGTACAAAGGCCCTGTTGTGGAGATGGTGTGGACCAAACATGCATCTCATCATCATCGTAGTAAAACAAATACCAAAATATCATCCTCTGAAAAAGATTGGTTCATAGGCTCCATATTTGTTATCATTTCTACCCTAGCTTGGGCATCCCTCTTTGTTTTACAGGCCAAAGTGATAGAGACATACAAGAATCATCAACTTAGCCTCACATCACTCATCTGCTTCATAGGAATGATTCAAGCTACTGTTGTTACTTTTTTAATGGAACACAAAACTTCAGTCTGGTCAATTGGCTGGGATATGAACTTGCTAGCTGCTGCCTATTCTGGTGTTTTTGCATCAAGCATGTCATACTACGTGCAAGGATTAGTGATGGAGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTCTCATGATGATCATCGTCGCCATAATGGGCTCCTTTATTCTCTCTGAACAAATTTATCTTGGAGGGGTGGTTGGCGCCATTTTAATTATTATAGGCTTATACTCAGTTTTGTGGGGAAAGAATAAAGAACAAAAACAGATAATGGAGAACAAAGTGACAGACGAGAATATATCCTTGCCTATAAAGTGTGCTCAAATTGATGAAAAAAATTCAAATCAAAATGCTGAAGCAGCCAACAAAATATCTTTGGTGGCAATTGATTTGTCTCTCCCTAATTCTCACATGAATGTTATTAACCAAGAAGAAAAGTTTTAA 1206 0.3914 MGTEKVRCCSKFVENSQHYFAMIILQFVYAGMNIITKVSLNKGMSHFVLVVYRQVFATAAIAPFAIIFERKHQPRITFPIFIQIFILALLGPVIDQNLYYAGLKFTSPTFACAMSNTLPAMTFVMALLCRMEKINMKKLRCQAKVIGTIVTVAGATVMTLYKGPVVEMVWTKHASHHHRSKTNTKISSSEKDWFIGSIFVIISTLAWASLFVLQAKVIETYKNHQLSLTSLICFIGMIQATVVTFLMEHKTSVWSIGWDMNLLAAAYSGVFASSMSYYVQGLVMEKKGPVFATAFSPLMMIIVAIMGSFILSEQIYLGGVVGAILIIIGLYSVLWGKNKEQKQIMENKVTDENISLPIKCAQIDEKNSNQNAEAANKISLVAIDLSLPNSHMNVINQEEKF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151100g00025 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Stsc151100g00025 401 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020
Stsc151100g00025 401 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020
Stsc151100g00025 401 PANTHER WAT1-RELATED PROTEIN 19 346 IPR030184 GO:0016020|GO:0022857
Stsc151100g00025 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151100g00025 Stsc-Chr151100 131101 135537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151100g00025 1 398 Nodulin-like Gene Family AT5G07050 61.975 5.53e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151100g00025 - - gmx:100799947 552.747