Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151100g00004 ATGAACAAGTTAATGACTCTGGATTTGGGTAAGCCTAGTCATATAACAAACAACCTTGCTTCCCTTCTAGGAAATGGCATTCTCAGAGCTAATGGGGTTAGCTGGTCACATCAGAGAAAACTTGTTGCTCCTGAGTTCTTCATGGAAAAAGTTAAGGGTATGGTGGACCTGATGATAGAGTCCGCGCAACCGTTGTTAACAAAATGGGACAAAGCTATTGAGGCCAAAGGCAGTGATGAAGTTGAAATTGAAGTTGATGAAGATTTGAGGAGTTTAGCAGCTGATGTTATTTCAAGAGTTTGTTTTGGCCATTCGCATTCCAAAGGAATTGAAGTTTTCTCTAAGCTTAGGCTAATGCAGAAGAAGATGTCCAAACATGGTGCCTTCCTTTTTGGAATCAAAGGTTTACGGGAGGTAGAGTCACTAATCTGGGAGTTAGTGGAGAAACGCAAGGAAGAATGCTCAGAGAAACCTTCATCAAAGAAAGATCTGATGCAGCTGTTATTGGAAGCAGCAATGAGTGATTCAAGTCTGCCAAAAGATTTTGCTAAGCAATTCATTGTGGATAATTGCAAGAACATATACTTTGCTGGGCATGAAACGGTTGCAGTGACTGAATCTTGGGCTTTGATGCTCCTTGCTGTGTATCCAGAGTGGCAAGATCGTGTAAGAAAAGAGGTTGCTCAAGTTTTCTCCAATGGCATACCAAATGCTGATGATCTTCCTCTCTTGAAAACGTTGACTATGGTGATACAAGAAGTGCTACGCTTATACCCACCAGGAGCATTTGTATCAAGAGAGGTGTACAAAGATACCCAAATTGGAGAACTGAATGTTCCCAAAGGTGTTTGTTTATGGACACTAATTCCAACTATACATAGGGATCCTGAAATCTGGGGACCAAATGCAAATGAGTTTGAACCAGAAAGGTTCAAAGATGGTGTCTCTAAGGCTTGCAAGTATCCACAAGCATATGTGCCATTTGGAGTGGGTCCTCGCTTGTGTGTTGGCAAGAACTTTGCAATGGTTCAATTGAAGGTTGTTCTTGCCTTAATCATCTCTAGGTTTAGCTTCTCTCTATGTCCTAGCTATAAGCATGCTCCTGCTTATAGAATGATTATTGAACCTGGTCATGGTGTTCAAATCCTTATTCACAAGATCTGA 1164 0.4124 MNKLMTLDLGKPSHITNNLASLLGNGILRANGVSWSHQRKLVAPEFFMEKVKGMVDLMIESAQPLLTKWDKAIEAKGSDEVEIEVDEDLRSLAADVISRVCFGHSHSKGIEVFSKLRLMQKKMSKHGAFLFGIKGLREVESLIWELVEKRKEECSEKPSSKKDLMQLLLEAAMSDSSLPKDFAKQFIVDNCKNIYFAGHETVAVTESWALMLLAVYPEWQDRVRKEVAQVFSNGIPNADDLPLLKTLTMVIQEVLRLYPPGAFVSREVYKDTQIGELNVPKGVCLWTLIPTIHRDPEIWGPNANEFEPERFKDGVSKACKYPQAYVPFGVGPRLCVGKNFAMVQLKVVLALIISRFSFSLCPSYKHAPAYRMIIEPGHGVQILIHKI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151100g00004 387 PRINTS E-class P450 group I signature 206 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS E-class P450 group I signature 325 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS E-class P450 group I signature 92 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS E-class P450 group I signature 335 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 SUPERFAMILY Cytochrome P450 14 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 Gene3D Cytochrome P450 7 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS P450 superfamily signature 326 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS P450 superfamily signature 249 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PRINTS P450 superfamily signature 197 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 328 337 IPR017972 GO:0005506|GO:0016705
Stsc151100g00004 387 Pfam Cytochrome P450 14 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00004 387 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151100g00004 Stsc-Chr151100 13685 16090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151100g00004 1 384 Cytochrome P450 AT5G24900 51.232 1.04e-156 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151100g00004 K20661 - gmx:100815776 591.652