Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151098g00007 | ATGATTCTGATCCTAAGTTGTGGCAATTGCAAGAGTAGTAGTGAGTGCAATTTGGAAGAAGAAGAAGAAGAATCAGAGAAGAAAGTGCTGAAACAAGGTTCATTCCAGAGGCTATGTTTATCAGATGTAAGCAATTCAAGTTCATCACAAGCAATTGAAGATCTTTCAGTGTCACTGGGGGCAGGATCAAATAAGCTTTATACATTCACACTTGAGGAGTTAAGAGAAGCAACAAACAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGTTTTGGTCCTGTTTACAAAGGCTTCTTTGATGATAAGCTTAGGCATGGCTTGAAGCCTCAAACTGTTGCTGTTAAGAGATTGGATTTAGATGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATATTTCTGGGGCAACTAAGGCATCCACATCTTGTTAAGTTAATTGGTTATTGCTATGAAGATGAGAACAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGTGCAGCAAAAGGCTTGGCCTTCCTTCATGGAGCAGATAAACCTGTAATATACAGAGATTTCAAAGCTTCAAATATCTTGTTAGACTCAGATTTTACGGCTAAGCTCTCGGATTTCGGTTTGGCTAAGGATGGACCTGAAGGTGAAGATACACATGTAACAACAAGGATCATGGGAACACAAGGTTATGCTGCTCCTGAATACATCATGACAGGCCACCTTACAACCAAAAGTGACGTGTATAGCTACGGAGTTGTTCTGTTGGAACTAATAACGGGAAAAAGGGTTGTGGACAAGTCCCTAACAAATAGAGGAAAAAGCTTGGTGGGGTGGGCAAGGCCTATGCTAAGAGACTCAAAGAAATTGAAGCAAATCATAGATAGAAAATTGGAAGGTCAATTCCCCATGAAAGGTGCCATGAAGGTTGCTTCTTTGGCTTATAGATGCTTATGTCACCATCCAAATCCAAGGCCTACTATGAGTGATGTTGTGAAGACATTGGAGCCACTACAAGACTTTGATGATATTTTCATGGGGCCATTTGTGTATGTTGCCACCAATGAAAATGGAAACAAAGATTCAAGATAG | 1161 | 0.41 | MILILSCGNCKSSSECNLEEEEEESEKKVLKQGSFQRLCLSDVSNSSSSQAIEDLSVSLGAGSNKLYTFTLEELREATNNFSWSNMLGEGGFGPVYKGFFDDKLRHGLKPQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLVYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHGADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKSLTNRGKSLVGWARPMLRDSKKLKQIIDRKLEGQFPMKGAMKVASLAYRCLCHHPNPRPTMSDVVKTLEPLQDFDDIFMGPFVYVATNENGNKDSR | 386 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151098g00007 | 386 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 368 | - | - | |
Stsc151098g00007 | 386 | PANTHER | OS01G0588500 PROTEIN-RELATED | 44 | 362 | - | - | |
Stsc151098g00007 | 386 | FunFam | Serine/threonine-protein kinase BIK1 | 45 | 163 | - | - | |
Stsc151098g00007 | 386 | FunFam | Serine/threonine-protein kinase PBS1 | 164 | 367 | - | - | |
Stsc151098g00007 | 386 | ProSiteProfiles | Protein kinase domain profile. | 81 | 369 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151098g00007 | 386 | CDD | STKc_IRAK | 87 | 361 | - | - | |
Stsc151098g00007 | 386 | Pfam | Protein tyrosine and serine/threonine kinase | 83 | 358 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc151098g00007 | 386 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 358 | IPR011009 | - | |
Stsc151098g00007 | 386 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 207 | 219 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc151098g00007 | 386 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151098g00007 | Stsc-Chr151098 | 83032 | 85533 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151098g00007 | 68 | 358 | Glycoside Hydrolase | AT3G07070 | 53.401 | 6.37e-102 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Stsc151098g00007 | PK_Tyr_Ser-Thr | 2.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151098g00007 | - | - | gmx:100802636 | 637.491 |