Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151098g00007 ATGATTCTGATCCTAAGTTGTGGCAATTGCAAGAGTAGTAGTGAGTGCAATTTGGAAGAAGAAGAAGAAGAATCAGAGAAGAAAGTGCTGAAACAAGGTTCATTCCAGAGGCTATGTTTATCAGATGTAAGCAATTCAAGTTCATCACAAGCAATTGAAGATCTTTCAGTGTCACTGGGGGCAGGATCAAATAAGCTTTATACATTCACACTTGAGGAGTTAAGAGAAGCAACAAACAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGTTTTGGTCCTGTTTACAAAGGCTTCTTTGATGATAAGCTTAGGCATGGCTTGAAGCCTCAAACTGTTGCTGTTAAGAGATTGGATTTAGATGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATATTTCTGGGGCAACTAAGGCATCCACATCTTGTTAAGTTAATTGGTTATTGCTATGAAGATGAGAACAGGCTTTTGGTTTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGTGCAGCAAAAGGCTTGGCCTTCCTTCATGGAGCAGATAAACCTGTAATATACAGAGATTTCAAAGCTTCAAATATCTTGTTAGACTCAGATTTTACGGCTAAGCTCTCGGATTTCGGTTTGGCTAAGGATGGACCTGAAGGTGAAGATACACATGTAACAACAAGGATCATGGGAACACAAGGTTATGCTGCTCCTGAATACATCATGACAGGCCACCTTACAACCAAAAGTGACGTGTATAGCTACGGAGTTGTTCTGTTGGAACTAATAACGGGAAAAAGGGTTGTGGACAAGTCCCTAACAAATAGAGGAAAAAGCTTGGTGGGGTGGGCAAGGCCTATGCTAAGAGACTCAAAGAAATTGAAGCAAATCATAGATAGAAAATTGGAAGGTCAATTCCCCATGAAAGGTGCCATGAAGGTTGCTTCTTTGGCTTATAGATGCTTATGTCACCATCCAAATCCAAGGCCTACTATGAGTGATGTTGTGAAGACATTGGAGCCACTACAAGACTTTGATGATATTTTCATGGGGCCATTTGTGTATGTTGCCACCAATGAAAATGGAAACAAAGATTCAAGATAG 1161 0.41 MILILSCGNCKSSSECNLEEEEEESEKKVLKQGSFQRLCLSDVSNSSSSQAIEDLSVSLGAGSNKLYTFTLEELREATNNFSWSNMLGEGGFGPVYKGFFDDKLRHGLKPQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLVYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHGADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKSLTNRGKSLVGWARPMLRDSKKLKQIIDRKLEGQFPMKGAMKVASLAYRCLCHHPNPRPTMSDVVKTLEPLQDFDDIFMGPFVYVATNENGNKDSR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151098g00007 386 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Stsc151098g00007 386 PANTHER OS01G0588500 PROTEIN-RELATED 44 362 - -
Stsc151098g00007 386 FunFam Serine/threonine-protein kinase BIK1 45 163 - -
Stsc151098g00007 386 FunFam Serine/threonine-protein kinase PBS1 164 367 - -
Stsc151098g00007 386 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151098g00007 386 CDD STKc_IRAK 87 361 - -
Stsc151098g00007 386 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Stsc151098g00007 386 SUPERFAMILY Protein kinase-like (PK-like) 54 358 IPR011009 -
Stsc151098g00007 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Stsc151098g00007 386 Gene3D Phosphorylase Kinase; domain 1 40 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151098g00007 Stsc-Chr151098 83032 85533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151098g00007 68 358 Glycoside Hydrolase AT3G07070 53.401 6.37e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151098g00007 PK_Tyr_Ser-Thr 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151098g00007 - - gmx:100802636 637.491