Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151098g00001 ATGAGAAGTCCTCCTTCTTCTTCATCTTCCTCACTCCTCACTTACTATATAACCACACTCCACACCCTTCCGCCGTCAATTCCACATCCAAATCACCACACAATTAAAATAGAAAACCTTCATTCAATTGAAAATCCATACACACAAACACATACACATATGTCTAATAACATCACTGCTTCTCCTAATGATGTATCAACCTTGAACAACTCAAAAGATTCGAGTAATTGCAAGATATACAAAGGTGTGAGGAAGAGGAAATGGGGCAAATGGGTATCCGAAATTAGGCTTCCAAATAGCCGCGAAAGGATATGGTTGGGTTCTTATGATACCCAAGAAAAGGCGGCCCGAGCCTTCGACGCCGCCCTCTATTGCCTTCGCGGCCGCCACGCCAGTTTCAATTTCCCGGACACACCTCTTAAGTTGGAGATCAACAACAATGTAAGTCACTACCATTCTCTCTCTCACCAAGAAATTCAAGAAGTTGCATCAAAATTCGCCAATAATATTGATGCATCAAATAATGAGAATAATGCTAATGCCAATGAGGAGGAGGAAGAGGAACCATCATCAATGGTGTCATCGCAAAATGGCTCTAATAGTGGGTATGATTATGATGGGAATAATAATAATAGTAATGGTAATAAAAACGTGCAAGTGGACCAGGGGGACATAGATTGGACATTTTTGAATGTGTTGGACGATCAAAATGATTCGAATTTTGATAATACTATTGGCTATGATTTTGGCCCCTACTATGGAGGGATAGATAAGGTGCACTCAGATGAGTTTTTGTATACTACTACACCACCAACAATTTATCAGGATAACAATGGTGATGGTGATGATGCTTTTTCTAACCATTCATTCCTTTGGAGTTGGAATTTTTGA 891 0.3996 MRSPPSSSSSSLLTYYITTLHTLPPSIPHPNHHTIKIENLHSIENPYTQTHTHMSNNITASPNDVSTLNNSKDSSNCKIYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGRHASFNFPDTPLKLEINNNVSHYHSLSHQEIQEVASKFANNIDASNNENNANANEEEEEEPSSMVSSQNGSNSGYDYDGNNNNSNGNKNVQVDQGDIDWTFLNVLDDQNDSNFDNTIGYDFGPYYGGIDKVHSDEFLYTTTPPTIYQDNNGDGDDAFSNHSFLWSWNF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151098g00001 296 FunFam Ethylene-responsive transcription factor 2 78 137 - -
Stsc151098g00001 296 MobiDBLite consensus disorder prediction 191 218 - -
Stsc151098g00001 296 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Stsc151098g00001 296 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Stsc151098g00001 296 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Stsc151098g00001 296 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Stsc151098g00001 296 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Stsc151098g00001 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 64 215 - -
Stsc151098g00001 296 CDD AP2 78 138 IPR001471 GO:0003700|GO:0006355
Stsc151098g00001 296 MobiDBLite consensus disorder prediction 52 71 - -
Stsc151098g00001 296 MobiDBLite consensus disorder prediction 171 218 - -
Stsc151098g00001 296 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Stsc151098g00001 296 Pfam AP2 domain 80 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151098g00001 Stsc-Chr151098 16499 17451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151098g00001 80 296 AP2-EREBP Transcription Factor Family AT1G19210 41.014 5.01e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc151098g00001 AP2 6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151098g00001 - - gmx:112999363 215.312