Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151096g00019 ATGGGAATAGCTAGAGGGCTGTTGTATTTGCGTGACCATTGTGACAGGCCAATCATCCATAGAGATATTAAATCTGATAATATTCTGCTCACCAAAGATTTTGAGCCACAGATTTGTGATGATTCTGGGCTTGCAAAGTGGTTGGAGCCAGATGCTGATCGGCAACAGGCCACAAGATTTGAAGGCACATTTGGGTTTGGGAAGAAGAAGAAATGCAGTAGTCATGGTGGTAGCGGTTCGGAAAAAAAGTTCTCATTGGATGATGCTTTTTTACTCACCAAACCCAAAATTAGCCCTTTTAGGCGTCGCAACTTTTTGTTTTCTTCTCCGTCCCCGTCACTTCCGCCACAAGGGTTGAGGCATGGGGATAGGGGTTATAGATATTCCTTAACCCCAACAAGATCTGAATACTCCTCATCATCAACAACACCACCACTCTTTCCCATTGGAGCCCATGATCATGACGATGATACTCCACCAAACCAAGACCTTCACAGCTTTAATTCTCAGCTCATCACTTTCACATCCTTTCAAATTCGACATGCAACCAAAAATTTTAGCCAAGAGAATTTAATTGGAAGAGGTGGGTATGCTGATGTGTTCAAGGGTCGTTTGAATGGGGAAATGGTAGCTATAAAGAGATTGAACAAAGGCACTAACAATAGCAGAAACTCATCATCATCAAACTTTCAGAAAGAGCTTGACATCATTGCCTACATTGACCATCCTAATACTGCCAAGCTTATTGGATACAGTTCAGACAAGGAATTCTGCCTTGTCTTCCAACTTTCTCCACTCGGAAGTTTAGCTTCTGTTCTCCATGGTCCAAATAGAAACATATTAACGTGGAATAGAAGGTATGGTATTGCCATGGGAATAGCTAGAGGGCTGTTGTATTTGCATGACCATTGTGACAGGCCAATCATCCATAGAGATATTAAATCTGATAATATTCTGCTCACCAAAAATTTTGAGCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTGGAGCCAGATACTGATCGGCAACAGGCCACAAGATTTGAAGGCACATTTGGGTATTTTGCTCCTGAATATTTGACACATGGAATAATAGATGAGAAAACAGATGTTTATGCATTCGGAATCCTGTTGCTGGAGATTTTAACTGGACGTAAGGCTTTGGATGATTTGCAAGAAAGCATTTTGATATGGGCAAAGCCAATGATGGAGGATCATAATGTTAAGGAGCTTGTAGACCCATCGCTTGGTGATGATTATGAGATAGAAGAGGTTGAACGTGTTATTTTGACAGCTTCTCTGTGTGTTGAGCAATCTCCTTTCCTGCGCCCTCGCATGGTTCAGACTCTGGAATTGCTCAAACCTGAAGAAGAAGATGATGATGACGATGGGATAGTCTTGGAATTTGACTACGATGGAACTGCAAGGCCCCTTACTTAG 1443 0.42 MGIARGLLYLRDHCDRPIIHRDIKSDNILLTKDFEPQICDDSGLAKWLEPDADRQQATRFEGTFGFGKKKKCSSHGGSGSEKKFSLDDAFLLTKPKISPFRRRNFLFSSPSPSLPPQGLRHGDRGYRYSLTPTRSEYSSSSTTPPLFPIGAHDHDDDTPPNQDLHSFNSQLITFTSFQIRHATKNFSQENLIGRGGYADVFKGRLNGEMVAIKRLNKGTNNSRNSSSSNFQKELDIIAYIDHPNTAKLIGYSSDKEFCLVFQLSPLGSLASVLHGPNRNILTWNRRYGIAMGIARGLLYLHDHCDRPIIHRDIKSDNILLTKNFEPQICDFGLAKWLEPDTDRQQATRFEGTFGYFAPEYLTHGIIDEKTDVYAFGILLLEILTGRKALDDLQESILIWAKPMMEDHNVKELVDPSLGDDYEIEEVERVILTASLCVEQSPFLRPRMVQTLELLKPEEEDDDDDGIVLEFDYDGTARPLT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151096g00019 480 PANTHER OS08G0249100 PROTEIN 1 66 IPR046958 -
Stsc151096g00019 480 MobiDBLite consensus disorder prediction 131 146 - -
Stsc151096g00019 480 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 265 464 - -
Stsc151096g00019 480 SMART serkin_6 186 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151096g00019 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Stsc151096g00019 480 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151096g00019 480 ProSitePatterns Protein kinases ATP-binding region signature. 192 213 IPR017441 GO:0005524
Stsc151096g00019 480 Gene3D Transferase(Phosphotransferase) domain 1 265 472 - -
Stsc151096g00019 480 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
Stsc151096g00019 480 SUPERFAMILY Protein kinase-like (PK-like) 159 454 IPR011009 -
Stsc151096g00019 480 Pfam Protein tyrosine and serine/threonine kinase 2 55 IPR001245 GO:0004672|GO:0006468
Stsc151096g00019 480 MobiDBLite consensus disorder prediction 131 158 - -
Stsc151096g00019 480 Pfam Protein kinase domain 187 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151096g00019 480 Gene3D Phosphorylase Kinase; domain 1 165 263 - -
Stsc151096g00019 480 ProSiteProfiles Protein kinase domain profile. 186 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151096g00019 480 SUPERFAMILY Protein kinase-like (PK-like) 2 66 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151096g00019 Stsc-Chr151096 93849 103383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151096g00019 1 66 Trihelix Transcription Factor Family AT1G70460 51.515 2.37e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc151096g00019 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151096g00019 - - aip:107646486 506.523