Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151096g00003 ATGGCGGTTGATCATATAACTTATTTGCTTTCGAAATTGCAAGCGCTATCGACTTCAGATCATAGCTCCGTGGTGTCCATGAACATATTCGTGGCACTGCTGTGTGCTTGCATTGTCCTTGGACATCTTCTTGAGGAGAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACTGGCGTACTCATTTTGATGCTTAGCGGTGGTAGAAACTCGCATATTCTTGTTTTCAGCGAAGATCTTTTCTTCATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTCATCACCATCATGATGTTTGGTGCTATTGGTACATTGATAAGTTGTGCCATCATAACTTTTGGTGTTGCAAAAACTTTCAAGAGTATCGGAATTCATTCTCTGGAAATCGCGGATTATCTAGCTATTGGTGCAATATTTTCTGCTACAGATTCTGTCTGCACCCTTCAGATCCTAAATCAGGATGAAACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGTGTAGTAAATGATGCTACGTCAGTGGTGCTTTTTAATGCAATCCAAAGCTTTGACATCAACCAAATTAATCCATCAATAGGATTGCAGTTCGTTGGCAACTTCTTGTATCTATTTACCACAAGCACTCTTCTTGGGGTTTTGACTGGTCTACTTAGTGCTTACATTATTAAGAAACTTTACATTGGCAGGCACTCAACAGATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAAGTAAGTTCTAAAGATATTTTTGTACATGCTTTTGCTACCTTGTCATTTGTTGCCGAGACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCCAGCGACAGGCCTGGAACTTCCCTTGCTGTGAGTTCAGTATTGTTGGGTCTAGTACTTGCCGGAAGAGCAGCGTTTGTTTTCCCCTTATCATTCATATCCAACATCACTAGGAAATCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGGTTATTTGGTGGGCTGGTCTTATGAGAGGAGCCGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCAATTATGATCACCAGCACCATCACTGTTGTGCTATTCAGTACTGTGGTGTTCGGTTTGATGACAAAACCGTTAATAAGGTTTTTGCTCCCTGTGCCCGCCGGCAATACGCCGAAAAGGAAAAGCAGCGTTGCGAACATAGCAGATTCAGCTTCTCCAAAAGCAATCACAGTACCATTCCTTTCGAATAGCCAAGACTCTGAAGCAAACCTTGAACCCCAAGAAAGTTCTTACGGTCCAACACCAAGGAGCATTCGTGACTTACTATCCACTCCCACACACTCCGTTCATCGTTTATGGCGCAAATTCGATAACTCATTTATGCGCCCAGTTTTTGGTGGCAGAGGCTTTGTTCCATCTGACCGCGGTCCACCAATCGAGCGCAACACCCAAAATCAGTGGCATTGA 1581 0.4288 MAVDHITYLLSKLQALSTSDHSSVVSMNIFVALLCACIVLGHLLEENRWMNESITALVIGICTGVLILMLSGGRNSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAIGTLISCAIITFGVAKTFKSIGIHSLEIADYLAIGAIFSATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLQFVGNFLYLFTTSTLLGVLTGLLSAYIIKKLYIGRHSTDREFALMMLMAYLSYMMAEVSSKDIFVHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPGTSLAVSSVLLGLVLAGRAAFVFPLSFISNITRKSSKEGISFRQQVVIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLFSTVVFGLMTKPLIRFLLPVPAGNTPKRKSSVANIADSASPKAITVPFLSNSQDSEANLEPQESSYGPTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPSDRGPPIERNTQNQWH 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151096g00003 526 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151096g00003 526 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151096g00003 526 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151096g00003 526 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151096g00003 526 PANTHER SODIUM/HYDROGEN EXCHANGER 17 503 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc151096g00003 526 Gene3D - 146 198 - -
Stsc151096g00003 526 Pfam Sodium/hydrogen exchanger family 29 273 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151096g00003 526 Pfam Sodium/hydrogen exchanger family 274 417 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151096g00003 526 MobiDBLite consensus disorder prediction 456 476 - -
Stsc151096g00003 526 MobiDBLite consensus disorder prediction 505 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151096g00003 Stsc-Chr151096 24092 28341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151096g00003 9 523 Antiporters AT3G05030 65.804 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151096g00003 - - aip:107645855 900.197