Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151094g00029 | ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATTCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGACTCTGGACTAGTTCTCTCAACTGATGCTAAGCCGCGATTGAAATGGACACCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGATAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCACGGACAAAACAACAATGTGACACACAAAATCACAACAAATGCGAGTGCAACAACAAGTGAAAGATCACTTTCTGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGGCCCACAGCCTAACAAAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGGTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCAGCCAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCAGCATTTTCGGAGCTGAAGGAACTACCAGGATTTTGCCCCCAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATTGATAGTTGCCTCACATCTTGTGATGGTTCACAGAAGGAGCAAGATATACAGAATGGTGGGGTAGGTTTAAGGCACTTAAATTGCCATGGCCATGCATTCATGGAAAGAAAGGAAGGCACAGAAGGTCCTAAATGGAGTAATGAAGTGAAAAACAACACATTTCTAGCACCATTAGGCAGGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCCATGAGCATTGGACTTGAAAGGGAAAGGGAAACTGAGAATGGAAGCAGCATGTACACTGAGAGTCACACTCACACAGAAGGTGAGTTCTGGCACAGGAACAGCAATGGGACAGAACCAAAGAAAGAAGCAATGGATGGAGGAAGAGGTCCTCAAGATTATAGGTTGCCTCCTTCTTACTTTTCAGCAGCAAGATTGGACTTAAACTCACATGGAGATAACAATGAAGCTGCAGCAACAACAACAACAAGTTGTAAACAACTGGACTTGAACAGATTCAGTTGGAGCTGA | 1272 | 0.4387 | MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQNNNVTHKITTNASATTSERSLSEPSGTHMNKLSLGPQPNKDLHISEALQMQIEVQRRLNEQLEVQRHLQVRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELPGFCPQQPQTNQPNDCSIDSCLTSCDGSQKEQDIQNGGVGLRHLNCHGHAFMERKEGTEGPKWSNEVKNNTFLAPLGRNSERSSYGAERSSGNLSMSIGLERERETENGSSMYTESHTHTEGEFWHRNSNGTEPKKEAMDGGRGPQDYRLPPSYFSAARLDLNSHGDNNEAAATTTTSCKQLDLNRFSWS | 423 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151094g00029 | 423 | Coils | Coil | 149 | 169 | - | - | |
Stsc151094g00029 | 423 | MobiDBLite | consensus disorder prediction | 352 | 376 | - | - | |
Stsc151094g00029 | 423 | MobiDBLite | consensus disorder prediction | 309 | 378 | - | - | |
Stsc151094g00029 | 423 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 40 | 100 | IPR017930 | - | |
Stsc151094g00029 | 423 | MobiDBLite | consensus disorder prediction | 114 | 138 | - | - | |
Stsc151094g00029 | 423 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 43 | 98 | IPR006447 | GO:0003677 | |
Stsc151094g00029 | 423 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 6 | 334 | IPR044848 | GO:0003700 | |
Stsc151094g00029 | 423 | MobiDBLite | consensus disorder prediction | 114 | 144 | - | - | |
Stsc151094g00029 | 423 | Pfam | MYB-CC type transfactor, LHEQLE motif | 147 | 193 | IPR025756 | - | |
Stsc151094g00029 | 423 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
Stsc151094g00029 | 423 | SUPERFAMILY | Homeodomain-like | 42 | 98 | IPR009057 | - | |
Stsc151094g00029 | 423 | FunFam | Myb family transcription factor | 42 | 100 | - | - | |
Stsc151094g00029 | 423 | Gene3D | - | 42 | 100 | - | - | |
Stsc151094g00029 | 423 | Pfam | Myb-like DNA-binding domain | 45 | 96 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151094g00029 | Stsc-Chr151094 | 144673 | 147267 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151094g00029 | 75 | 423 | G2-like Transcription Factor Family | AT3G04030 | 50.420 | 3.73e-95 | 286 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Stsc151094g00029 | Myb_DNA-binding | 3.7e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151094g00029 | - | - | gmx:100810396 | 620.542 |