Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151093g00003 ATGGCAGAGGTGATCGGAACATTTATTTTGATGTTCTGTGTAAGTGGAATAATAGCAACGACAAAATTCCAAAGTGGTGAAGTGGGGCTTCTAGAATATGCAGCAACAGCAGGATTAACAGTGGTTGTCATCATCTTCTCCATTGGACCAATTTCTTGTGCTCATGTCAACCCTGCTGTCACTATTGCCTTTGCAACAATTGGTCATCTTCCATGGTTCAAGGTTCCAATTTACATAATAGCACAGATAGTAGGTTCTATATTGGCAACATTTATAGGTAGCCTTGTTTATGGCATAAAATCAGAAGCTATGATGACAAGGCCAATCCAAGGTTGCAACTCTGCATTCTGGGTTGAACTCATTGCAACCTTCATCATCATGTTCCTTGTTGCAGCTTTGACATCTGAGTATCAATCAATTGGGCATTTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAACCCAGCAAGATCATTAGGGCCAGCAATTGTTTCATGGAAATTCAAAGATATTTGGATTTACATGATAGCACCAAGTGGAGGAGCCATAGCTGGAGCTCAAACCCTTCATTTTCTTCGCCTTAATAAGGACCAAAATTGCAACACTACTTTGTCTTCTCCAACCATCAGTGACGTTGGTCACCCCATACCCTATTCTTCAAGGAGAAATGGAAATGGAAATGGAAATGGACCCATGATTTTGGTGGTAGAGAAAAATTGGAGCTTGTTATCTGAGAGAGTAGAAGGGTTCAGACAAAGATACGTCTTAGGAACAAAGGGAATACCACATGATGATGATGAGGATCACAATGTTTAA 858 0.4091 MAEVIGTFILMFCVSGIIATTKFQSGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHLPWFKVPIYIIAQIVGSILATFIGSLVYGIKSEAMMTRPIQGCNSAFWVELIATFIIMFLVAALTSEYQSIGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKDIWIYMIAPSGGAIAGAQTLHFLRLNKDQNCNTTLSSPTISDVGHPIPYSSRRNGNGNGNGPMILVVEKNWSLLSERVEGFRQRYVLGTKGIPHDDDEDHNV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151093g00003 285 SUPERFAMILY Aquaporin-like 1 210 IPR023271 -
Stsc151093g00003 285 PRINTS Major intrinsic protein family signature 149 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 PRINTS Major intrinsic protein family signature 37 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 PRINTS Major intrinsic protein family signature 118 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 PRINTS Major intrinsic protein family signature 186 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 PANTHER AQUAPORIN NIP2-1 1 215 IPR034294 -
Stsc151093g00003 285 Pfam Major intrinsic protein 1 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151093g00003 285 ProSitePatterns MIP family signature. 55 63 IPR022357 -
Stsc151093g00003 285 Gene3D Glycerol uptake facilitator protein. 1 219 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151093g00003 Stsc-Chr151093 17461 19727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151093g00003 2 211 Major Intrinsic Protein MIP AT4G10380 43.128 3.91e-51 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151093g00003 K09874 - gmx:100817660 379.407