Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151092g00009 ATGGTGGACATTGAATCTCAAACTACTCATAATCATCATCAAGAAGTGCCAAACAATTTCTTCCACAAGAGAAAAACTCCAGTAACTCTTAAGTTTGAAGATGTTGTGTACAAGATCAAGATTGAGCATGGTGGATTATTGGACAAGAAGAAAAAGACATCAGAACGCAAAGTCATATTGAATGGGGTAACCGGAATGGTTCAACCGGGTGAGATCCTTGCCATGTTAGGTCCCTCAGGAAGCGGCAAGACAACACTTCTAACTGCATTGGGCGGCCGGCTTGGCGGCCGCCTCAACGGAAAAATAACCTACAACGGAAACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTACACCCTCACCTAACTGTAACGGAAACCCTAGTTTTCACCGCCCTCCTCCGGCTACCGAACACGGTAACCAAAGAGGAGAAGGTGGAATTGGCAAATTCCGTGATGAACCAACTTGGGTTGACCAAGTGTAAGGACAGCATTGTCGGGGGACCCGGGCTAAGAGGGGTCTCAGGTGGAGAAAGGAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTCCTTGATGAACCTACCTCAGGTTTGGATTCAACTACCGCATTGAGGCTTGTGTCAACTTTGTTTGAGCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTTCTATATGTTCACTAAGGTGTTGCTTCTTTCAGAAGGGAACACTCTGTATTTTGGAATGGGCTCTGAGGCTTTGGATTATTTCTCTAGTGTTGGATTTTCTCCTGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGGAATTTACACCAATGAAATGAATGAGGATGTTGTGGTGGAGAAACAAGAATTGATTCAAGCATTCAAGAGGCACTACAATGATTCTCAATTGAGGCCAATGGTGCAAGAAAGCAATAGCAATAATAACTCATCATCAAATAGTAGAGCTGAGGCCACTGCAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCCATGTGCTGCTGAGAAGAGACCTTAAAGAGAGAAGGCACGAAGCTTTTGCTTCCTTCAATGTTATTCAGATCCTCATCACTTCTTTCATTGTAGGACTTTTGTGGTACAAGTCTGATACCTCACACATTCAAGATCAGCTTGGACTTCTGTTCTTCATAGCAAATTTCTGGGCATTTTATCCTCTCTACAGAGCAATCTTCGTCTTCCCAGACGAAAGAGTGATGCTGGTGAAAGAAAGATCTTCAGGAATGTACAGACTATCCTCATACTACATGGCGAAAACAATGGTAGACCTTCCAATGGAACTCGTGCTCCCAACCGTTTCCATCATCATAATCTACTGGATGACAGGTCTCAAGGCCACCGCGGCCGCCTTCATCTTCACCCTCCTCATCACCCTTGCCCTTGTATTAGTCGCTCAGGGGGTAGGCCTCGCCCTCGGGGCCTACCTCGAGAACACGAAGGTCGCCACCACCTTTGCTTCCGTGATTGGACTAACCTTCATGATAACAAGTGGATTCTTGGTCCAGAATGTTCCGGTGTTCATGGCATGGGTTAAGTACTTGTCCTTCATCTATTACGCGAGCGAGCTTCTAATCTTTGCTCAGTACCATCAAGATCAGACTTATGACTGCCCTGGTGGTGGTAAGTGCTTGATTTATGAGTACTCTGGAATTAAGGGTCTAGGGTTCGTTAATAACAGGGAGACTCAATTAAGGGCTTCACTGCTTTTGCTGGTAATGCTATTTTTCTATAGGATTATAGCTTATGTTGCTCTTATGAGAATTGGAATCGCAAAGAAATCCAAGTCTAGCTAG 1908 0.4481 MVDIESQTTHNHHQEVPNNFFHKRKTPVTLKFEDVVYKIKIEHGGLLDKKKKTSERKVILNGVTGMVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLNGKITYNGNPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVTKEEKVELANSVMNQLGLTKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFELARGGRTIVMTIHQPSSRLFYMFTKVLLLSEGNTLYFGMGSEALDYFSSVGFSPALAMNPADFLLDLANGIYTNEMNEDVVVEKQELIQAFKRHYNDSQLRPMVQESNSNNNSSSNSRAEATAAGFGKWPTNWWQQFHVLLRRDLKERRHEAFASFNVIQILITSFIVGLLWYKSDTSHIQDQLGLLFFIANFWAFYPLYRAIFVFPDERVMLVKERSSGMYRLSSYYMAKTMVDLPMELVLPTVSIIIIYWMTGLKATAAAFIFTLLITLALVLVAQGVGLALGAYLENTKVATTFASVIGLTFMITSGFLVQNVPVFMAWVKYLSFIYYASELLIFAQYHQDQTYDCPGGGKCLIYEYSGIKGLGFVNNRETQLRASLLLLVMLFFYRIIAYVALMRIGIAKKSKSS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151092g00009 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 620 - -
Stsc151092g00009 635 Pfam ABC-2 type transporter 361 566 IPR013525 GO:0016020|GO:0140359
Stsc151092g00009 635 Pfam ABC-2 type transporter 239 342 IPR043926 GO:0140359
Stsc151092g00009 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 274 IPR027417 -
Stsc151092g00009 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 282 IPR003439 GO:0005524
Stsc151092g00009 635 MobiDBLite consensus disorder prediction 1 20 - -
Stsc151092g00009 635 FunFam ABC transporter G family member 22 47 276 - -
Stsc151092g00009 635 SMART AAA_5 69 259 IPR003593 GO:0016887
Stsc151092g00009 635 Gene3D - 47 276 IPR027417 -
Stsc151092g00009 635 Pfam ABC transporter 60 210 IPR003439 GO:0005524
Stsc151092g00009 635 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151092g00009 Stsc-Chr151092 108432 112155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151092g00009 59 243 Calmodulin-binding Proteins AT2G36910 30.890 6.48e-14 73.6