Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151092g00003 ATGTACGGGCGAAAAGCTTGTGAGCTTGTCAAAGAATTTGCAAGCGTAGGTAAAGGCCAGCTCACGCAGTACAATAGTGACCTCTTTGAACAAGTAGTTGCAGAATGCAGCCAGCATCACCTTGAGCTTCAGTCTTTGATAAGAAAAATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCATTATGGTGCCCTTATCCATCATCTTTCTTTGGTCCGCAATAAGCGCTGCCTAATGGCCTACGTAAATAACCGAGCTGAGATTATAAGAAGCTTGGTATGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGCTTAGTCATACAGAGGAAGAGTATTTCAGCAAGTATTCTGGAGAATTGAAAAAATATATGTCAAAAATGGAATTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGGATTGTTCTTAGTGATAAGACTGCAAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACCGATGCCGAACAATTCATTTCACGGGGCTTAATGGAGGAGCTCACAGGTTGA 597 0.4271 MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLVWKIGSVLPKEIEEKLSHTEEEYFSKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRGLMEELTG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151092g00003 198 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Stsc151092g00003 198 PANTHER PARTNER OF SLD5 1 197 IPR005339 GO:0000811|GO:0006260
Stsc151092g00003 198 Pfam GINS complex protein 43 116 IPR021151 -
Stsc151092g00003 198 Gene3D - 1 134 - -
Stsc151092g00003 198 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Stsc151092g00003 198 CDD GINS_B_Psf1 148 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151092g00003 Stsc-Chr151092 29167 31815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151092g00003 1 198 Core DNA Replication Machinery Family AT1G80190 67.662 3.69e-101 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151092g00003 K10732 - qsa:O6P43_027860 336.65