Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151091g00015 ATGGCAGACATAGGCAAGTTCTTCAGCAAATTCATCTCTTCATTCATCATCCTCATTGTTCATCTCGGCTGCTTCATCTTCACAACAACAAAGCAAGTAAACAACGACCACAACAACAACAATTTCTTGCAACCATCTTCAAAGAAACGTAAAATCTCACCTTCATCATCACACTCACAACCTTCTTCACCTTCCCACCCAAAACTCAAAACCCACAGAGCACTCTCCTCTTCTTGGCATTTCATCAAACACCTCTTCTCCACCAAAACCAAAACCGCCACAACAACCACCCATCCCTCCCCACAATCATCCACTGCCACCGCCACCACCACCACTGCCACAACCACCAACTCCGCCACCGTCGCCGCCGCCAGGCCCTCTCAGAATTCTCTTGTTTCCTCCTTGACATCCGACCCGAATTTCCTAGACCTTCCTCGCCGGAACACTCCCGGATCATTGACCCGACCCGAAAACGAAACCGCCGGCGAGCTGGACAGCGGCCTCTTCTTCCCTCTCCGGAATGATATATTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAGCCGCTCCTCCTGGAGCAGCACCAATCCACCAAGCACGCGGTGTCGGAGCTACCAGGATCCGATCCGGGTCACAACATAGTCCAGATCATATTCAAGTCGGGTTGGCCCGAGACCAGAAAGTTCCCCGCCATAACCCGGATCCTCAAGATCCATAACAGCCAAAAGATTCTCTCGCGATTCGAGGAGTACCGCGAGGCTGTCAAGGCGAGGGCTGCACGTCACAGCAGCAGTGGTGTGGGATCCACGCGCCGCCGTGATGAGCGGTGCCTTGCCGACGGCAATGAGCTCATGAGGTTTTTCGCCGAAATTGGACGGGATTTCCACGTTGGCATCCAGCTGGAGGGCCCACATATCGATCCCGGAGGATATTGA 936 0.5395 MADIGKFFSKFISSFIILIVHLGCFIFTTTKQVNNDHNNNNFLQPSSKKRKISPSSSHSQPSSPSHPKLKTHRALSSSWHFIKHLFSTKTKTATTTTHPSPQSSTATATTTTATTTNSATVAAARPSQNSLVSSLTSDPNFLDLPRRNTPGSLTRPENETAGELDSGLFFPLRNDIFPCTACGEIFQKPLLLEQHQSTKHAVSELPGSDPGHNIVQIIFKSGWPETRKFPAITRILKIHNSQKILSRFEEYREAVKARAARHSSSGVGSTRRRDERCLADGNELMRFFAEIGRDFHVGIQLEGPHIDPGGY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151091g00015 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 205 IPR013087 -
Stsc151091g00015 311 MobiDBLite consensus disorder prediction 36 70 - -
Stsc151091g00015 311 MobiDBLite consensus disorder prediction 90 143 - -
Stsc151091g00015 311 ProSitePatterns Zinc finger C2H2 type domain signature. 179 200 IPR013087 -
Stsc151091g00015 311 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 77 289 - -
Stsc151091g00015 311 MobiDBLite consensus disorder prediction 90 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151091g00015 Stsc-Chr151091 140135 141941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151091g00015 79 289 C2H2 Transcription Factor Family AT2G29660 45.581 7.84e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc151091g00015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151091g00015 - - aip:107608029 397.512