Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151089g00015 ATGATCATGGAGAATCTAGCAATACTTGTTATACTTTCTTTTGTGTTTATAAGCATTATTCATCATATTCTGAAATCCAAACTAGGCATCAAAACACATAAATCATCAACCAAATTCCCACCAGGACCTAAACCCTTGCCAATCATAGGAAACATCTTAGAACTTGGCAACCAACCTCACAAAGCACTTGCTAAACTTTCTCAAACATATGGACCAATAATGACTCTCAAGCTTGGTAACATAACCACCGTAGTTATCTCATCTCCTATGTTAGCCAAACAAGTCCTCCAAATACATGACCAAATTTGTTCCCATAGAACAATTCCGGATACTGTTAAGGTACTTAATCACCACTTGTATTCGATGGGATGGTTGCCGCCTTCTTCGCCTCAATGGAGGATCCTTAGGAGAGTTTGTGCTACGAAAGTGTTCTCTCCGCAACAACTTGATTCCACACAAGTTCTTCGTCAAAAGACACTGCGTGAACTAATGGATTTTATGAAGGAGAAAAGTGAAAAAGGCGAAGTTTTGAATCTCAGTGAAATTTATTTTACAACAATACTTAATTCTGTATCAAACACTTTCTTTTCTATCAATTTGGCTCATTACGAGGACTCTTGTAAGTCTCAAGAATTCAAGGATATAATTTGGGGCATTGGGGAAGAATCTTCCAAGCCTAATGTAGTGGACTTCTTCCCAATCTTTGGGTTACTTGATCCACAAGGTGCACGTGCAAGGATGAGCAAGCACACTGAAAAGTTGATAGCTTTCGTTGATGGTCTTATGGAAGAAAGATTGAAGTCAAGGGCTCTAGAGAAGGAGACAACCAATAAAAGATGCAAAGATGTGTTAGATTCTATTTTAGATGTTATGTTGGAAGACAATTCTCAGATTTTATTTGCGGCTGGAGTAGACTCAACATCAATCACCATAGTATGGGCAATGTCCGAGTTATTACGTAATCCAGAAAAGTTAGAAAAAACTAGAGAAGAGCTTCAATGTGTATATGGCAAAGGTGAACAAGTTCTTGAAGAATCACACGTATCAAAGCTTCCTTATCTAAGAGCAGTGGTTAAAGAAACTTGGCGCATGCATCCACCTGGCCCATTATTAATACCACACAAGACGTTGAGATAA 1137 0.3835 MIMENLAILVILSFVFISIIHHILKSKLGIKTHKSSTKFPPGPKPLPIIGNILELGNQPHKALAKLSQTYGPIMTLKLGNITTVVISSPMLAKQVLQIHDQICSHRTIPDTVKVLNHHLYSMGWLPPSSPQWRILRRVCATKVFSPQQLDSTQVLRQKTLRELMDFMKEKSEKGEVLNLSEIYFTTILNSVSNTFFSINLAHYEDSCKSQEFKDIIWGIGEESSKPNVVDFFPIFGLLDPQGARARMSKHTEKLIAFVDGLMEERLKSRALEKETTNKRCKDVLDSILDVMLEDNSQILFAAGVDSTSITIVWAMSELLRNPEKLEKTREELQCVYGKGEQVLEESHVSKLPYLRAVVKETWRMHPPGPLLIPHKTLR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151089g00015 378 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 376 - -
Stsc151089g00015 378 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 Pfam Cytochrome P450 40 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 SUPERFAMILY Cytochrome P450 35 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 Gene3D Cytochrome P450 29 378 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151089g00015 378 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151089g00015 Stsc-Chr151089 78760 80612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151089g00015 10 376 Cytochrome P450 AT2G45550 42.593 5.58e-106 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151089g00015 - - gmx:100779789 470.7