Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151089g00012 ATGATGATTTATGAATATGTTCCTAATGGCACTTTGAAGGATACTCTTTTAGGGGGGCTGGATTATCTCCATGAACATGCCAATCCTCCTATCATACATAGGGACATCAAATCCACAAACATATTATTGGATGAAGGCTTGAATGCGAAAGATTCTGATTTTGGACTCTCCAAACCATTGGGAGATGGCGAAAAAGGTTATATTACCATTCAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTACTATGACTCAACAATTGACAGACCCTCAATGAACTTTGTGGTGAAAGAGATTGAGAAATTGTTGCAGTTGGCTGGTTCAAACCCCAATGCAGAGTCTGCATCCAGTTATGAAGTAAGCAAAGGGAGTTCTCAACATCCTTACAGCAAAGGGTGA 402 0.408 MMIYEYVPNGTLKDTLLGGLDYLHEHANPPIIHRDIKSTNILLDEGLNAKDSDFGLSKPLGDGEKGYITIQVKGTMGYLDPEYYDSTIDRPSMNFVVKEIEKLLQLAGSNPNAESASSYEVSKGSSQHPYSKG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151089g00012 133 PANTHER RECEPTOR-LIKE PROTEIN 55 2 86 - -
Stsc151089g00012 133 Pfam Protein kinase domain 15 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151089g00012 133 MobiDBLite consensus disorder prediction 109 133 - -
Stsc151089g00012 133 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151089g00012 133 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Stsc151089g00012 133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Stsc151089g00012 133 SUPERFAMILY Protein kinase-like (PK-like) 1 87 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151089g00012 Stsc-Chr151089 65024 66031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151089g00012 1 84 Receptor kinase-like Gene Family AT5G49760 59.615 2.11e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc151089g00012 Pkinase 5.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151089g00012 - - aip:107638780 144.05