Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151089g00009 ATGAATTCCATACCTTCAAAAAGCTTATGGATTCGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTACATTACATATGAGGGTGATTCTGATGAGGGTTCTGGAGGACAAGAATTGGTGAAGGCAGAAAAAGCTTCATCCGGTGCCATGATCACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGGTTCTCTGTTAGGAAGGAAAGGTCTAGGGTTAGCCCCCAGTTGGGAATTTACAAGCGGGACTTTGTTTGTTACTGTTCCGGATTCGCCCCGGTGAAGAGGAAGCCTAATGGAGAGCACCATAGAGATAGGAAATCGGTTAGGTGCGGATGCGATGCGAAGATGTATCTGTCTAAAGAGGTGGTTGATGGGGTTTCCCAATGGTTTGTAGTGCAATTCAGTAATATCCATAATCATGAGCTTCTGGAAGATGACCAAGTTCGGCTTCTTCCGGCGTATCGCAAGATTCACGAGGCTGATCAAGAGCGCATACTCTTGCTTTCTAAAGCAGGGTTTCCGATACACCGGATAGTGAAGATGCTGGAGCTGGAAAAGGGGATTCAAGGTGGGCAATTGCCTTTCTTGGAGAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAACGAGGCATTGCTCACTGAGAAGAGGGAAAATGATATATCAGAACTTCTTGAGGCCTGCAAAGCCATGAAAGAAGTTGATGGTGACTTTGTTTATGATTTCACAGTGGATGAGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGTGAATCTGTTAATGCAAATGCTATGTTTGGCGATGTGGTTTATTTCGACACAACATATCGATCCATCACTTATGGATTGCTTTTTGGAGTGTGGTTTGGTATTGATAGCTGTGGCAGAACCGTCTTCTTCGGTTCTGTTTTGTTGCAGGATGAAACTCCTCAATCCTTCTCATGGGCATTGCAGGTTAACTACTAG 1032 0.438 MNSIPSKSLWIRRQQCPCGDWKCYITYEGDSDEGSGGQELVKAEKASSGAMITPYVGMVFKSDDEAFEYYGNFARKNGFSVRKERSRVSPQLGIYKRDFVCYCSGFAPVKRKPNGEHHRDRKSVRCGCDAKMYLSKEVVDGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLTEKRENDISELLEACKAMKEVDGDFVYDFTVDENDKVENVAWSYGESVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSCGRTVFFGSVLLQDETPQSFSWALQVNY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151089g00009 343 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Stsc151089g00009 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 340 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151089g00009 Stsc-Chr151089 52043 54539 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151089g00009 FAR1 3.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151089g00009 - - aprc:113874854 644.039