Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151089g00006 ATGAATTCCATACCTTCAAAAAGCTTATGGATTCGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTACATTACATATGAGGGTGATTCTGATGAGGGTTCTGGAGGACAAGAATTGGTGAAGGCAGAAAAAGCTTCATCCGGTGCCATGATCACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGGTTCTCTGTTAGGAAGGAAAGGTCTAGGGTTAGCCCCCAGTTGGGAATTTACAAGCGGGACTTTGTTTGTTACTGTTCCGGATTCGCCCCGGTGAAGAGGAAGCCTAATGGAGAGCACCATAGAGATAGGAAATCGGTTAGGTGCGGATGCGATGCGAAGATGTATCTGTCTAAAGAGGTGGTTGATGGGGTTTCCCAATGGTTTGTAGTGCAATTCAGTAATATCCATAATCATGAGCTTCTGGAAGATGACCAAGTTCGGCTTCTTCCGGCGTATCGCAAGATTCACGAGGCTGATCAAGAGCGCATACTCTTGCTTTCTAAAGCAGGGTTTCCGATACACCGGATAGTGAAGATGCTGGAGCTGGAAAAGGGGATTCAAGGTGGGCAATTGCCTTTCTTGGAGAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAACGAGGCATTGCTCACTGAGAAGAGGGAAAATGATATATCAGAACTTCTTGAGGCCTGCAAAGCCATGAAAGAAGTTGATGGTGACTTTGTTTATGATTTCACAGTGGATGAGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGTGAATCTGTTAATGCAAATGCTATGTTTGGCGATGTGGTTTATTTCGACACAACATATCGATCCATCACTTATGGATTGCTTTTTGGAGTGTGGTTTGGTATTGATAGCTGTGGCAGAACCGTCTTCTTCGGTTCTGTTTTGTTGCAGGATGAAACTCCTCAATCCTTCTCATGGGCATTGCAGACTTTTCTCCGATTCATGAACGGAAGATGCCCACAAACAATTCTAACTGATCTTGACCCTGGGCTTAAAGATGCCATTAGAAGTGAATATCCAGGAACTAAACATGTCATTCCACCATGGAATATTCTATACAAGAGGAGTTTGAACTGCAGTGGAGAGACATGA 1185 0.4346 MNSIPSKSLWIRRQQCPCGDWKCYITYEGDSDEGSGGQELVKAEKASSGAMITPYVGMVFKSDDEAFEYYGNFARKNGFSVRKERSRVSPQLGIYKRDFVCYCSGFAPVKRKPNGEHHRDRKSVRCGCDAKMYLSKEVVDGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLTEKRENDISELLEACKAMKEVDGDFVYDFTVDENDKVENVAWSYGESVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSCGRTVFFGSVLLQDETPQSFSWALQTFLRFMNGRCPQTILTDLDPGLKDAIRSEYPGTKHVIPPWNILYKRSLNCSGET 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151089g00006 394 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Stsc151089g00006 394 Pfam MULE transposase domain 291 382 IPR018289 -
Stsc151089g00006 394 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 385 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151089g00006 Stsc-Chr151089 51880 54539 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151089g00006 MULE 2.1e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151089g00006 - - aprc:113874854 729.554