Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151088g00012 ATGGCTTCAGTTTACCGCAATTCGAGCTCCGGATCGGAGGGCGGAGATCCCGCGATGGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGCGGCGTTCGCGGATGAGGAAGCAAAAGCAGCTTGAGGATCTGACGGAAGAGGTTAAGCGGCTTGAGGTCTCCAACAAGAGCATGATTGAGGCCATTAAGGTGAAGGAGGAAGGTTATGCAAAGATTGAAGCCGCAAACGGCGTCATCAGGGCTCAGATGATGGAGCTGGAGGACAGGCTCAGGTTCCTCAATTCTATTCTCGAAATTGCTGAAGTCGTTGGTGGCGGCAGCGGCGTCAGCGAGCTCTCCGTTGATTTGCCGGAGATTCTGGATCCTCTCTTGAAGCCATGGCAGATTCCTCACCCATTTCAGCCAATTATGGCTTCGGCAGACATGTTCCTGCATTGA 450 0.54 MASVYRNSSSGSEGGDPAMDERKRKRMLSNRESARRSRMRKQKQLEDLTEEVKRLEVSNKSMIEAIKVKEEGYAKIEAANGVIRAQMMELEDRLRFLNSILEIAEVVGGGSGVSELSVDLPEILDPLLKPWQIPHPFQPIMASADMFLH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151088g00012 149 CDD bZIP_plant_GBF1 23 66 IPR045314 GO:0003700|GO:0006355
Stsc151088g00012 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 7 145 - -
Stsc151088g00012 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 62 IPR004827 GO:0003700|GO:0006355
Stsc151088g00012 149 Pfam bZIP transcription factor 22 77 IPR004827 GO:0003700|GO:0006355
Stsc151088g00012 149 MobiDBLite consensus disorder prediction 16 46 - -
Stsc151088g00012 149 Gene3D - 20 74 - -
Stsc151088g00012 149 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Stsc151088g00012 149 Coils Coil 31 65 - -
Stsc151088g00012 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Stsc151088g00012 149 MobiDBLite consensus disorder prediction 1 46 - -
Stsc151088g00012 149 SUPERFAMILY Leucine zipper domain 22 71 IPR046347 GO:0003700|GO:0006355
Stsc151088g00012 149 FunFam BZIP transcription factor 20 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151088g00012 Stsc-Chr151088 130339 130788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151088g00012 9 147 bZIP Transcription Factor Family AT3G62420 51.049 2.17e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151088g00012 bZIP_1 5.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151088g00012 K25786 - gmx:780550 192.2