Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151087g00005 ATGGCTATCCCCGACGACCCTTCTTCCAACCTAACGCCATCTTCATTCTCTGATTCTTCTCAAGTTTCTCCACCCGACGACACAGAATCTCCGCCATCCCGTCATGACGACGACGACGACCACGACGACCATTCCTCCCATAAATCCAAGAAAAATAAGTCCGATTCATCAAACTCATCGCCTCATCCATCACCTAAACCGCCCAAATCTCCAAAGGCCCCATCTAAACCACCAAAACACTCGCCTCATCCAAAGGCCCCACCTCCGTCTCCGCCGCCACCTCCACCGCCAGTGGCGTCACCTCCGCCACCACGTGCTATACCTCCTCCAAGCTCAACTACTTTAATAACGCCACCACCACCTTCACATTATTTAACTCCACCTCAAGTTATTCCTTCTCATCCTCCACCTCCTCCTCCTCCACCACCGCTGCCTCCAAACCGCCCCATTACGCCGCCACGATCACCTCCTCCGCCTTCAAGATCAGGCGGTGGTTCATCTTCGAAACGGCATTTTCCGGCGCCGGGGTCGTCAAGTTCGCATTCACGAGTGTATATAGAGCATCATGTTGGTTACGCAGTGGCTGCAATTTCCATCATTTCCGTCATTGCCGTACTTATCTTCTATGTTTTGAGGAAGAAGAAACATCGACGCGATGCCGGTGGAGATTTTCAATACTACGTGGACAAACCCAATAATGGTGCACAAGGAGGAATGTACGGTTCACAAAGATCCCAATTTGCACCGGTGGGGGGCAGCGGCGGCTATGGAAGTAGTGGTGGTAGCAGTGGAGGTGTTGGGATGGTGTACTATTTAAGATCACCTTGCCAAATGAGCGGGGGTCCAATGGCATATAGCTACGAACAAATCGTGGGAGTAACGAAGGGGTTTTCGAGTGAGAGCGTAATAGGAGAAGGTGGGTTCGGGTATGTGTACAAGGCGTTGATGCCAGATGGTAGAGTAGGAGCAGTGAAGATGCTCAAACCAGGTAGCGGGCAAGGAGAGAGAGAGTTTAGTGCTGAGGTTGAGATTATTAGTAGGGTTCATCATCGTCATTTGGTTTCTCTCATTGGTTATTGCGTTGCTCAGCACCATAGAGTGCTTGTCTATGAGTTCGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTTCCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAAGGGCCTAGCTTATCTGCATGAGGGCTGCAATCCAAGGATTATTCATAGAGATATTAAGTCAGCAAACATACTTTTGGACAATGCTTACGAAGCACGGGTAGCAGACTTTGGACTAGCCAGACTAACGGATGACGCTAACACCCACGTATCAACTAGAGTGATGGGAACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGGAAATTAACGGATAGATCAGATGTATTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACAGGAAGGAAGCCTGTTGATCCAACGCAGCCCATCGGACACGAGAGTTTGGTTGAGTGGTGTCGTCCACATCTTCTTCAAGCAATGGGGACGCGTGAGGTTGGTGATCTAGTAGACCCAAGGCTTCAAGGATGCTATGTTCATGCTGAAATGTTTACCATGATTGAGGCTGCCGCCGCTTGTGTTCGTCACTCTGCTCCTAAACGTCCCCGTATGGTTCAGGTGGCAAGAGCCTTAGAGGGTGGAGATCAACTAGATCTATCAAATGGGGTGAAATACGGTGAAAGCAGAATATATGATAGCCAGTACAATAGTGATATTATGAGATTTAGAAGGATGATGGCTGATGACAGTTTTAGCGGTTATGATTATGATTTGTATAGTACACAACACAGTTCAAGAGATTTGTATTCTTCTTCAGGGATGCCAACTAGGCCAGGTGGTAATTCAGAACCTAGAAATTTCAACTCCCATAGGAGCTTTGCTGAGCAACCATAA 1971 0.482 MAIPDDPSSNLTPSSFSDSSQVSPPDDTESPPSRHDDDDDHDDHSSHKSKKNKSDSSNSSPHPSPKPPKSPKAPSKPPKHSPHPKAPPPSPPPPPPPVASPPPPRAIPPPSSTTLITPPPPSHYLTPPQVIPSHPPPPPPPPPLPPNRPITPPRSPPPPSRSGGGSSSKRHFPAPGSSSSHSRVYIEHHVGYAVAAISIISVIAVLIFYVLRKKKHRRDAGGDFQYYVDKPNNGAQGGMYGSQRSQFAPVGGSGGYGSSGGSSGGVGMVYYLRSPCQMSGGPMAYSYEQIVGVTKGFSSESVIGEGGFGYVYKALMPDGRVGAVKMLKPGSGQGEREFSAEVEIISRVHHRHLVSLIGYCVAQHHRVLVYEFVPNGNLSQHLHGNNFPVLDWPNRMKIANGAAKGLAYLHEGCNPRIIHRDIKSANILLDNAYEARVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPIGHESLVEWCRPHLLQAMGTREVGDLVDPRLQGCYVHAEMFTMIEAAAACVRHSAPKRPRMVQVARALEGGDQLDLSNGVKYGESRIYDSQYNSDIMRFRRMMADDSFSGYDYDLYSTQHSSRDLYSSSGMPTRPGGNSEPRNFNSHRSFAEQP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151087g00005 656 Gene3D Phosphorylase Kinase; domain 1 272 372 - -
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 1 181 - -
Stsc151087g00005 656 FunFam proline-rich receptor-like protein kinase PERK8 373 584 - -
Stsc151087g00005 656 Pfam Protein tyrosine and serine/threonine kinase 300 566 IPR001245 GO:0004672|GO:0006468
Stsc151087g00005 656 Gene3D Transferase(Phosphotransferase) domain 1 373 583 - -
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 161 181 - -
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 29 55 - -
Stsc151087g00005 656 SUPERFAMILY Protein kinase-like (PK-like) 277 570 IPR011009 -
Stsc151087g00005 656 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 198 611 IPR047117 -
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 61 160 - -
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 7 28 - -
Stsc151087g00005 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Stsc151087g00005 656 CDD STKc_IRAK 303 572 - -
Stsc151087g00005 656 ProSiteProfiles Protein kinase domain profile. 297 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151087g00005 656 MobiDBLite consensus disorder prediction 624 656 - -
Stsc151087g00005 656 SMART serkin_6 297 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151087g00005 656 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 273 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151087g00005 Stsc-Chr151087 59024 63823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151087g00005 133 651 Trihelix Transcription Factor Family AT1G70460 51.277 1.75e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Stsc151087g00005 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151087g00005 - - adu:107488704 729.939