Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151086g00018 ATGGGTTCTTCGGTTGGAGGAGGCAACAGCAACAACGCAGGCGTTGAGTGGCACGTGCGGCCTTCGAACCCTAAGAACCCCATCGTCTTTTTCGATGTCACCATCGGTAACATCCCTGCTGGCAGGATCAAGATGGAGCTCTTCGCTGATATTGCCCCCAAAACCGCTGAGAATTTCAGGCAGTTCTGCACTGGAGAGTACAGGAAAGCAGGACTGCCTATTGGCTACAAGGGTTGTCAATTTCATAGGGTTATTAAGGATTTTATGATTCAGGCCGGTGATTTCGTAAAGGGTGATGGTAGTGGATGTGTCTCTATCTATGGACACAAGTTCGATGATGAAAATTTTATTGCGAAACACACTGGCCCTGGTCTTCTATCAATGGCAAACAGTGGAGTAAACACCAACGGTTGTCAGTTCTTCATAACTTGTTCAAAATGTGACTGGCTTGACAACAAGCACGTGGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCCGGAAGATCGAGAACGTCGCAACTGGACCCAATAACCGGCCGAAGTTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 585 0.4718 MGSSVGGGNSNNAGVEWHVRPSNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPIGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGVNTNGCQFFITCSKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151086g00018 194 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 76 93 IPR020892 GO:0003755|GO:0006457
Stsc151086g00018 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 29 194 - -
Stsc151086g00018 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 Gene3D - 16 194 IPR029000 -
Stsc151086g00018 194 SUPERFAMILY Cyclophilin-like 17 194 IPR029000 -
Stsc151086g00018 194 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 193 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 FunFam Peptidyl-prolyl cis-trans isomerase 16 194 - -
Stsc151086g00018 194 CDD cyclophilin_ABH_like 27 192 - -
Stsc151086g00018 194 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 192 IPR002130 GO:0000413|GO:0003755
Stsc151086g00018 194 PIRSF Peptidylpro_ismrse 15 194 IPR024936 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151086g00018 Stsc-Chr151086 153306 161542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151086g00018 23 192 U-box Gene Family AT5G67530 41.860 1.04e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151086g00018 K09567 - gmx:100305521 382.104