Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151086g00016 ATGATTGTTGATGGTGTAATGTCGCATTATGATGAAATTTTTAGGCTGAAAGGCGTTGCAGCTAAGGCTGATGTTTTCCACTTGCTGTCTGGGATGTGGAAAACACCTGCTGAGAGGTGCTTTTTGTGGCTTGGTGGTTTTCGATCATCTGAACTCCTCAAGCTCCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGCTTTTGGGTATTACAAACTTGCAGGAGTCCTCCCAGCAAGCAGAAGATGCATTATCTCAAGGCATGGAAGCATTGCAACAATCCCTTGCTGAGACATTGTCCACCGGATCACAAAATTCATCCGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGGCTGACAATCTGCGCCAGCAAACTCTACAGCAAATGCACCGTATCCTAACAACTCGCCAATCAGCTCGTGCACTACTTGCAATACATGACTACTTTTCCCGGTTGCGTGCGCTTGGTTCACTCTGGCTGGCCCGCCCAAGAGATTAA 558 0.4731 MIVDGVMSHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLLGITNLQESSQQAEDALSQGMEALQQSLAETLSTGSQNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALGSLWLARPRD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151086g00016 185 ProSiteProfiles DOG1 domain profile. 1 182 IPR025422 GO:0006351|GO:0043565
Stsc151086g00016 185 PANTHER TRANSCRIPTION FACTOR TGA9 1 184 - -
Stsc151086g00016 185 Pfam Seed dormancy control 2 58 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151086g00016 Stsc-Chr151086 137439 139856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151086g00016 1 185 bZIP Transcription Factor Family AT5G06950 83.243 1.29e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151086g00016 K14431 - gmx:100101881 336.65