Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151086g00011 ATGGGATTTAGAAACCTGGGGACACTTGGATCTATTGTCAAGGAGGCGTGGGAAAAAGCATTCTCCCTCGGAAAGTTCTTCTGCTTTCTACATGTCGTTGACACCTATTTGGTCACCCATGTTGTGACAATTGGTCCCAGCATGTTTCCTGCAATAGACATGACCCTGACCCTGTTTTTGTGTGAAAGATTCTCAACTAGATCTGACAAACTTACTTGTGGAGATATTGTGATTATTCCCTTCCCTCAAAACCCTAAGAGGAGGCTGACTAAACGATTGGTTGGAATGGAGAATGATACCATTACATACATTTCTAACCCTGATGAGCCTGATAAGAAGGAAACTATTGTGGTTCCAAAGGGTCACGTTTGGATACAAGGTGATTGA 387 0.4264 MGFRNLGTLGSIVKEAWEKAFSLGKFFCFLHVVDTYLVTHVVTIGPSMFPAIDMTLTLFLCERFSTRSDKLTCGDIVIIPFPQNPKRRLTKRLVGMENDTITYISNPDEPDKKETIVVPKGHVWIQGD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151086g00011 128 SUPERFAMILY LexA/Signal peptidase 35 128 IPR036286 -
Stsc151086g00011 128 CDD S26_SPase_I 41 95 IPR019533 GO:0004252|GO:0006465
Stsc151086g00011 128 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 128 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc151086g00011 128 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc151086g00011 128 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc151086g00011 128 Gene3D Umud Fragment, subunit A 32 128 - -
Stsc151086g00011 128 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 11 128 - -
Stsc151086g00011 128 Pfam Signal peptidase, peptidase S26 27 103 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151086g00011 Stsc-Chr151086 94862 95871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151086g00011 48 128 MADS-box Gene Family AT1G29960 43.210 3.66e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151086g00011 K09647 - pvy:116144419 141.354