Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151085g00016 ATGGGCATGGATTACTACAACATACTGAAAGTGAATCGAAACGCGAGCGATGAGGACCTGAAGAAAGCGTACAAGAGACTCGCCATGATCTGGCACCCTGACAAGAACCCTCACAACAAGTCCGAAGCTGAAGCCAAATTCAAACGTATCTCCGAAGCATACGATGTTCTCAGTGACCCTCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCTCTCAAGTCCGGTCAATTCCCTCCGCCTCCGCCGCCTTCGTCGTCCACTTCATCTTCCTACTATTCTTCTTCTTCTTCTTCTTCCTCTTCGCGCCATTACCAGAACGGTACCGCACACCAAAACCACCACCGCCAGAACCCTGGCACGTCGTCGTCGTCGTCATTTCGGTTTAATCCCCGGGACGCCGACGACATCTACGCCGAGATTTTCGGCAGCGAAGGGGCTGACGCGGGCAGCAGTGGGGCGAGGGGAGGTGGTGGCGTGCGGAGGGATGGGTTCTTTAAGACGCCGAATGGGTTCGGCGGCGCGGCGAGGAAGGCTGCTGCGGTGGAGAACGTGCTGCCGTGCAGCTTGGAGGATCTTTACAAGGGCGTCAAGAAGAAGATGAAGATCTCCAGAACCGTCTATGATGCTTTTGGAAAGTCCCGGAATGTGGAGGAGATTTTGACAATCGAGATAAAACCTGGCTGGAAGAAAGGAACAAAGGTTACTTTCCCGGAGAAGGGTAACCAGGAGCCCGGTGTCATCCCGGCGGATCTTGTTTTCGTGATAGATGAGAAACCACATATTCTTTATAGAAGGGATGGTAATGACTTGGTGATCCACCAGGAGATAACACTTTTGGAGGCTCTTACAGGTAAAACTTTGGACCTGACAACTTTAGATGGAAGGAGTCTCATGATCCCACTAACAGATATTGTCAAACCTGGTGCTGAGGTTGTTGTCCCCAATGAAGGAATGCCCATATCAAAAGAACCTGGGAAGAAGGGGAATTTGAGAATTAAGCTTGATGTCAACTATCCTTCAAGGCTAACTCCAGAGCAGAAATCTGATCTCAGAAGAGTTTTGGGTGGAGTCTCATAG 1083 0.5088 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPHNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPPPSSSTSSSYYSSSSSSSSSRHYQNGTAHQNHHRQNPGTSSSSSFRFNPRDADDIYAEIFGSEGADAGSSGARGGGGVRRDGFFKTPNGFGGAARKAAAVENVLPCSLEDLYKGVKKKMKISRTVYDAFGKSRNVEEILTIEIKPGWKKGTKVTFPEKGNQEPGVIPADLVFVIDEKPHILYRRDGNDLVIHQEITLLEALTGKTLDLTTLDGRSLMIPLTDIVKPGAEVVVPNEGMPISKEPGKKGNLRIKLDVNYPSRLTPEQKSDLRRVLGGVS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151085g00016 360 SUPERFAMILY Chaperone J-domain 3 86 IPR036869 -
Stsc151085g00016 360 MobiDBLite consensus disorder prediction 74 130 - -
Stsc151085g00016 360 MobiDBLite consensus disorder prediction 89 130 - -
Stsc151085g00016 360 CDD DnaJ 4 59 IPR001623 -
Stsc151085g00016 360 Pfam DnaJ domain 4 67 IPR001623 -
Stsc151085g00016 360 FunFam DNAJ heat shock family protein 261 356 - -
Stsc151085g00016 360 PRINTS DnaJ domain signature 6 24 IPR001623 -
Stsc151085g00016 360 PRINTS DnaJ domain signature 24 39 IPR001623 -
Stsc151085g00016 360 PRINTS DnaJ domain signature 62 81 IPR001623 -
Stsc151085g00016 360 PRINTS DnaJ domain signature 42 62 IPR001623 -
Stsc151085g00016 360 CDD DnaJ_C 187 344 - -
Stsc151085g00016 360 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Stsc151085g00016 360 FunFam Dnaj homolog subfamily b member 179 260 - -
Stsc151085g00016 360 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Stsc151085g00016 360 Gene3D - 262 342 - -
Stsc151085g00016 360 SMART dnaj_3 3 62 IPR001623 -
Stsc151085g00016 360 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 262 IPR008971 GO:0006457|GO:0051082
Stsc151085g00016 360 Pfam DnaJ C terminal domain 186 341 IPR002939 -
Stsc151085g00016 360 Gene3D - 181 260 - -
Stsc151085g00016 360 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 356 - -
Stsc151085g00016 360 Gene3D DnaJ domain 1 79 IPR036869 -
Stsc151085g00016 360 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 350 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151085g00016 Stsc-Chr151085 106870 110780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151085g00016 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 2.93e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151085g00016 K09510 - gmx:100781572 533.102