Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151085g00002 ATGGAGGATATGAATTCAATGCATGAGGAACCGCAATTGGAAGAACAAATGGAGTTTCTGTGTAATGTTGATGAGGAGTATGTTGCCAAGGTTGGGATGACGTTTAAGACATGTACGAAAGCTAATGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTGCTTCTCGAATTAGAAATTCACAGAGGAATAAAGAGACCAGTGCTATCAAGAATCAACTCTTCACATGTAACAGAGAGGGGAAAAGTACATCCGACATTCCCGAGGCGGAGAAGACGAACCTGATGTCTTCGGCAAATTGTCCGGCAAGGATGTTGTAA 321 0.4206 MEDMNSMHEEPQLEEQMEFLCNVDEEYVAKVGMTFKTCTKANEFYKEYAKRAGFASRIRNSQRNKETSAIKNQLFTCNREGKSTSDIPEAEKTNLMSSANCPARML 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151085g00002 106 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 106 - -
Stsc151085g00002 106 Pfam FAR1 DNA-binding domain 43 105 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151085g00002 Stsc-Chr151085 3660 4474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151085g00002 FAR1 1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151085g00002 - K17604 aip:110271906 91.6633