Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151084g00003 ATGACGGATTCAAGGAAGTCGTCGAACAAGATCAGGGACATTGTTCGGCTTCAACAGATCCTCAAGAAGTGGAAGAATAAGGCTGCAAATCATAATCATTATAGTAATAACAATTCTTCTACTTGTGGGAACACTGCTAGTTCTTCTTCTGGATCTGGCTTTGGCAGTAGTAAAGGCATCAAGTTTCTGAAAAGGACTCTGTCATTAAGCGAATTGTCTTCTTCTTCTTCTTCTTGTTCGGGTGAGATGGCTGTCCCAAAAGGGTGTCTTGCTGTTAGTGTTGGTGTTGGGAGTGAGGTGAAGAGATTCGTGATCCCAACAGAGTACTTGAGACACGAAGCATTCGAGATGTTGCTGCGTCAAGCCGAAGAAGAGTTCGGTTTCCAGCAGGAGGGGGTCCTCAGAATCCCATGCCAACTCTCCCTCTTCCACACCATACTCGACCTCCTCCAATGTAATAACAATAACAAACAACTCTGTTTAAACTTGCAACAACAACAACAACAAGAAGCAAAACAAGTCATCATTGCTCCATATGCATCGTCGGATTGCCAAGTAACTAATACTACTCCCACTCATCCCGATCAGATGTATTGCACATGA 603 0.4378 MTDSRKSSNKIRDIVRLQQILKKWKNKAANHNHYSNNNSSTCGNTASSSSGSGFGSSKGIKFLKRTLSLSELSSSSSSCSGEMAVPKGCLAVSVGVGSEVKRFVIPTEYLRHEAFEMLLRQAEEEFGFQQEGVLRIPCQLSLFHTILDLLQCNNNNKQLCLNLQQQQQQEAKQVIIAPYASSDCQVTNTTPTHPDQMYCT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151084g00003 200 MobiDBLite consensus disorder prediction 31 54 - -
Stsc151084g00003 200 Coils Coil 149 169 - -
Stsc151084g00003 200 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 71 145 IPR003676 GO:0009733
Stsc151084g00003 200 Pfam Auxin responsive protein 71 150 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151084g00003 Stsc-Chr151084 18591 19193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151084g00003 6 156 Calmodulin-binding Proteins AT2G24400 51.656 5.17e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151084g00003 K14488 - qsa:O6P43_017854 129.413