Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151084g00002 ATGAAACTTGCAACCATTTCCATTATGAGGTTGGGACTCGGAAGCCCTTGCAGTCGCCGCGACGGAAAGGTGCCATTACTGGCGTCCGATGGAAGCAGCAGCAGCAAGGTTCCGAAGGGATACGTTGCAGTGTATGTGGGGCCACAGATGCGGAGGTTTGTGATTCCCATCAGCTTCTTGGGGATGCCAGAGTTCAGGGTGTTGCTGGAGAGGGTGGAGGAGGAGTTTGGGTGCGACCATCATGGAGCAGGAGCTCTTGAAATTCCCTGCGACGACAAAGACCATTTTGAGGAAATATTGACGACGTGTTTTGCAAGGCAGCGGATGGCGTCTTCTTCTAATAACTCCAACAAGATACTTTCTATGCTGGCTTGA 375 0.5173 MKLATISIMRLGLGSPCSRRDGKVPLLASDGSSSSKVPKGYVAVYVGPQMRRFVIPISFLGMPEFRVLLERVEEEFGCDHHGAGALEIPCDDKDHFEEILTTCFARQRMASSSNNSNKILSMLA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151084g00002 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 98 IPR003676 GO:0009733
Stsc151084g00002 124 Pfam Auxin responsive protein 31 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151084g00002 Stsc-Chr151084 16884 17258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151084g00002 37 91 Calmodulin-binding Proteins AT3G43120 63.636 2.00e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151084g00002 K14488 - mtr:25491161 106.301