Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151082g00014 ATGTGTAGCCGAGGATTCAGGTTTTTTATCAATGCTTGCATTTTGTTCTCATTCACATCTTTAATTTCTGCTCTGGAACCCCAACTTGGATCCACCCGCGTTGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTTTCCAACTGTTGCACCCAAAACTGTTGATCACATCTTTAAGCTCGTCAGACTTGGAGGCTATAACACTAACCATTTCTTTAGGGTGGATAAGGGGTTTGTGGCCCAAGTAGCGGATGTTATGGGTGGAAGATCTGCTCCGATGAATGAGGAACAAAGAAAAGAAGCTCAAAAGACTGTTGTTGGCGAATTTAGCGAAGTCAAACATGTTCGTGGTATTCTTTCTATGGGAAGGTACGAGGATCCAGACAGTGGTTCATCCTCATTCTCAATACTACTTGGAGATGCTCCCCATCTTGACGGCACGTATGCAATATTTGGGAAAGTTACTAAAGGTGATGATACATTGAAAAAGCTCGAGCAGCTGCCTACCCGTAAAGAGGGTATATTTGTAATGCCAACAGAACGCATCACTATCCTATCATCATATTACTATGACACAGAGTCGGAAAACTGTGAGCAAGATAGATCGATATTGAAGCGCAGGTTAGCTGCAACTGCAGTCGAAGTTGAAAAACAGAGGATGAAATGCTTCCCTTGA 681 0.4229 MCSRGFRFFINACILFSFTSLISALEPQLGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQRKEAQKTVVGEFSEVKHVRGILSMGRYEDPDSGSSSFSILLGDAPHLDGTYAIFGKVTKGDDTLKKLEQLPTRKEGIFVMPTERITILSSYYYDTESENCEQDRSILKRRLAATAVEVEKQRMKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151082g00014 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 13 226 IPR044233 -
Stsc151082g00014 226 SUPERFAMILY Cyclophilin-like 26 193 IPR029000 -
Stsc151082g00014 226 CDD cyclophilin 35 188 - -
Stsc151082g00014 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Stsc151082g00014 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Stsc151082g00014 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Stsc151082g00014 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Stsc151082g00014 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Stsc151082g00014 226 Gene3D - 22 198 IPR029000 -
Stsc151082g00014 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151082g00014 Stsc-Chr151082 105289 108272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151082g00014 34 189 U-box Gene Family AT5G67530 28.659 9.59e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151082g00014 - - gmx:100819238 390.578