Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151081g00007 ATGGAGCTACAAACACCAACCACGGCGGCCAACACTACTTCATCCGTAACCGCCGCAACAAAATCCACCGTCTCTCGCGTAGGAGGAACGCGCCACCCTGTCTACCGCGGCGTGCGGAAGCGTCGATGGGGGAAATGGGTTTCAGAGATTCGAGAGCCTCGCAAGAAGTCACGCATATGGCTCGGTTCCTTCCCTTCGCCGGAGATGGCGGCGAAAGCCTACGACGTCGCCGCCTACTTCCTCAAAGGCCGAAAAGCGCAGCTCAATTTTCCCGACGAGGTTCACCGTCTTCCGCCGCTTCCTCCGCCGTCTTCATGCACCGCACGTGACATCCAAGCCGCAGCTGCAAAAGCAGCACACATGGCCGCCGCCGCCGCAGACGCCGAAGCCGTCAATTCCTCCGAAGACGCCGGTGATTCGCCGGAGAAGTGCGGCATTTCGAATTCTTCCTCCGACGGCGACGATTTCTGGGGCGAAATTGAGCTGCCGGAGCTCATGAACGATGGAGAGTGCAGATGGAGTTATTCTCACGGCGGAGGTGGGTGGAACTCCGCCGGAAACGGCGGCTCCGGCGACGTAACGGCTTGGCCGGAAGTGGAGTTACCGTATAGTGGTTAG 618 0.6003 MELQTPTTAANTTSSVTAATKSTVSRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYFLKGRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMAAAAADAEAVNSSEDAGDSPEKCGISNSSSDGDDFWGEIELPELMNDGECRWSYSHGGGGWNSAGNGGSGDVTAWPEVELPYSG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151081g00007 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 165 - -
Stsc151081g00007 205 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 PRINTS Ethylene responsive element binding protein signature 73 93 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 MobiDBLite consensus disorder prediction 177 205 - -
Stsc151081g00007 205 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Stsc151081g00007 205 MobiDBLite consensus disorder prediction 1 27 - -
Stsc151081g00007 205 MobiDBLite consensus disorder prediction 1 32 - -
Stsc151081g00007 205 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Stsc151081g00007 205 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 MobiDBLite consensus disorder prediction 130 157 - -
Stsc151081g00007 205 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Stsc151081g00007 205 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151081g00007 Stsc-Chr151081 69773 70618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151081g00007 1 183 AP2-EREBP Transcription Factor Family AT1G01250 54.787 6.21e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc151081g00007 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151081g00007 K09286 - gmx:100806544 205.682