Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151079g00015 ATGGCTATGGAGAACAACTATTCATACCCATCTTACCCAGACTCAGGGGACTCTTCTCCCCGCTCAAGAGAGATCGACTTCGAGAACCCTCCTCCATGGGACGAGCAACAACCCCCGCCCAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGAAAGATCCAGCCCCGTACCCACGACAACCAACTCTCCTACGTCGCCGGCGAGACCAAGATCCTCGCTGTGGACCTCAACATAAAGTTTAACGCCATGATTGCCAAACTCTCCGCACTCTGCGGCTGCGACCCCAAGGAACTGTCCTTCAAGTACCAGCTCCCTGGTGAGGATCTTGACGCTCTCATCTCGGTCACTAATGATGACGACCTTGACCACATGATGCACGAATACGATCGACTCTACCGTGCTTCCGCTAGACCTGCCCGCATGCGATTATTCCTCTTCCAAGCCAACTCTGCTAACAGTAATAACAACCCTCCTGCCTCTTCTGATAACCGTCTTGACCCGACCCAGCCCGACCCGCTTAAACCGAATCCCAACGTGGATTATCTCTTTGGTCTTGAGAAGAATCCTGCTGTTAATGTTGCTCCTCAGCAGCTGCAGCCACCTGTACCTTCGCCTGCGGCGGCTCCTATCCCCGTCAAGTTACATGATACGGCACCGGAGCCTGTTCCTCCGCCGCCGGAGTACCAACAGAGAGTCCCCGTTAACATCTCCGATCGTACCGTTGGATCGGATCCGAACGTGAGCCACCCGCTGGAGGTTCAGAGGCAGTTTCAGAGGATGCAAATTTCGGAAAGCGAGCAAGCTGCTGCGTATCGGAGGAAGAGCGAGGAAGGTCTCGTCGGGAATTATGCCCCTGCCACCGGCGGTGACTATTACGCTCAGAAAGCTCCTCCGGCGTCTAACTTTCCGGCGAGTGCGCCTTTACAGCCTGGATATTGGCCTGAGAAGCATGTTTCCGGCGAGGCTTATCATCCCGCGGTGTCGTCGGCTGCCGGAGGTGGTGAGCCGCCGGTTTATGTGATTCCGGCGCATGGAGCATTCTATCATCACGCGCCGCCAGTGGTTCGTCCACAGACTCCCCCACCGACATCGCAGGGATACTACGCGGTGCAGCGAATGGCTTCCGATGGTTACCGCGAAGCTCCGGTATACGGCGGCGTTCCGCCACATAAGCCGCCGTTTTCTTCGGCTGCTCCGGCGAACCTAGCACAGGCTCAGCCGGTTAAAGGTCCAGCTTATACAGACGGATTCGGGGTAGTTAGGCCAGTTGGATTGCAGGATAACACCGGGGCGGCGTACGCACAGGTGGCGTACGATAGTGGAAGTGGAAGACAGGTTTACTATACTGCGCCTGGTGGTGGTGTGATGCACGCTCCGCCGTATCAAGGAGTTACTCAGGCGGTAACCGGTGATATGAGAGCGGGTGGGGTGTCGTTGGGTCAAGATGGTAAGGTCATAAGCAAGGTTTCTCAAGGTTCTGTGTGA 1488 0.5618 MAMENNYSYPSYPDSGDSSPRSREIDFENPPPWDEQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVAGETKILAVDLNIKFNAMIAKLSALCGCDPKELSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFQANSANSNNNPPASSDNRLDPTQPDPLKPNPNVDYLFGLEKNPAVNVAPQQLQPPVPSPAAAPIPVKLHDTAPEPVPPPPEYQQRVPVNISDRTVGSDPNVSHPLEVQRQFQRMQISESEQAAAYRRKSEEGLVGNYAPATGGDYYAQKAPPASNFPASAPLQPGYWPEKHVSGEAYHPAVSSAAGGGEPPVYVIPAHGAFYHHAPPVVRPQTPPPTSQGYYAVQRMASDGYREAPVYGGVPPHKPPFSSAAPANLAQAQPVKGPAYTDGFGVVRPVGLQDNTGAAYAQVAYDSGSGRQVYYTAPGGGVMHAPPYQGVTQAVTGDMRAGGVSLGQDGKVISKVSQGSV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151079g00015 495 PANTHER OS05G0427100 PROTEIN-RELATED 12 349 - -
Stsc151079g00015 495 MobiDBLite consensus disorder prediction 151 178 - -
Stsc151079g00015 495 Gene3D - 64 149 - -
Stsc151079g00015 495 Pfam PB1 domain 59 148 IPR000270 GO:0005515
Stsc151079g00015 495 MobiDBLite consensus disorder prediction 151 168 - -
Stsc151079g00015 495 SUPERFAMILY CAD & PB1 domains 59 156 - -
Stsc151079g00015 495 CDD PB1_UP2 47 147 - -
Stsc151079g00015 495 MobiDBLite consensus disorder prediction 1 18 - -
Stsc151079g00015 495 MobiDBLite consensus disorder prediction 1 39 - -
Stsc151079g00015 495 SMART PB1_new 58 149 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151079g00015 Stsc-Chr151079 107362 110365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151079g00015 43 152 MAP Kinase Kinase Kinase AT3G46920 45.045 3.72e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151079g00015 - - adu:107480527 543.117