Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151078g00015 ATGGCAGAACCAAGGGCGATAACGGTCCGAATAGCTTGTGGCCATCAACTAGAGCACAACAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAAAAGATGCGAAGGACCGGTTTTGGAACAACATTTACTGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCCGAGGCACGGACAGTTCTTCCTCAGTGCTTCCCTTACAATGGCGGCCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATGCCGGGCCAGGAGACAATGCAGTGTGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGCAGCTGCAAAACAAGCAATTTTAACAGCAGTTCAAGATGCACCTAGCAACAAAGGATATGCTAGACGTAAGGTTTCCGTGTCCGGAACGGTTAATGAGTCTGCTTATGTGCTGGCTGGTTGTTGGAGGACTTTGAACACAAGCTCTTGCAAAGCATGTCTTGAGAATGCATCTTCTTCCATATTGGGATGCTTGCCTTGGGAAGAAGGGCGCGCGCTTAACACCGGTTGCTTCATGAGGTACTCGGACAAAGATTTCCTCAACAAGGAACATGAAAATAGAAGGCCAAAGGGTTCATATGATGCAGAGAAGTTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAAGGCTACTGGATCCTTTGATGAGAGTAACAAGTTAGGGCAAGGAGGATTCGGAACAGTTTACAAAGGAGTTCTACCCGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAATAACAAACATAGAGCAGCAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCAGACTGTTAGGATGTAGTTGTTCAGGACCCGAAAGCCTGCTTGTATATGAATATCTTCCCAATAGAAGTCTCGACCGCTTCATTTTCGACAAAAGTAAGGGAAGACAGTTGAACTGGGAGAAGAGATGCGAAATCATGGTTGGGACAGCTGAAGGATTAGCATATCTGCATGAGAAATCGAAAACTAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGCACTAAGATAGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTCTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTCGGCGTGCTACTGCTCGAGACAGTTACCGGGAGACAGAACAATAGGAGCAAAGTGACAGAATATTCAGACAGCTTAATTACAGTGGCATGGAAGCATTTTCAGTCAGGGACAGCTGAACAATTATTTGATCCAAATCTTCAGTTGCATGAAGACTACAACAACAGCAGTGTCAAGAATGAGATCCTAAGAGTGGTTCAAATAGGACTTCTATGCACCCAAGAGAACCATTTGCTGCGGCCAACAATGTCCAAAGTGCTACAGATGTTAACAAAGAAGGAGGAGCGACTTGCTGCTCCTGCTAATCCACCTTTTCTAGATGAGAATACCATGGAGTTCCATGACACAAGTGGTGACCGATTTTTCCCTCTGGTTGCAGACGACTCGATTGCTACCATGTCCTATAGCTCTTTTCATCCCAGGTGA 1761 0.4412 MAEPRAITVRIACGHQLEHNSTIYVPNFVATMEKISEKMRRTGFGTTFTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFFDEYAGPGDNAVCGNRTRKNSSFQAAAKQAILTAVQDAPSNKGYARRKVSVSGTVNESAYVLAGCWRTLNTSSCKACLENASSSILGCLPWEEGRALNTGCFMRYSDKDFLNKEHENRRPKGSYDAEKLAKSLRRSSLNFKYTSLEKATGSFDESNKLGQGGFGTVYKGVLPDGREIAIKRLYFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKSKGRQLNWEKRCEIMVGTAEGLAYLHEKSKTKIIHRDIKASNILLDAKLRTKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLETVTGRQNNRSKVTEYSDSLITVAWKHFQSGTAEQLFDPNLQLHEDYNNSSVKNEILRVVQIGLLCTQENHLLRPTMSKVLQMLTKKEERLAAPANPPFLDENTMEFHDTSGDRFFPLVADDSIATMSYSSFHPR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151078g00015 586 ProSiteProfiles Gnk2-homologous domain profile. 112 217 IPR002902 -
Stsc151078g00015 586 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 57 558 - -
Stsc151078g00015 586 Pfam Salt stress response/antifungal 22 105 IPR002902 -
Stsc151078g00015 586 Pfam Salt stress response/antifungal 123 214 IPR002902 -
Stsc151078g00015 586 FunFam Putative DUF26-domain receptor-like protein kinase family protein 231 334 - -
Stsc151078g00015 586 Gene3D - 8 107 IPR038408 -
Stsc151078g00015 586 Gene3D - 117 217 IPR038408 -
Stsc151078g00015 586 SUPERFAMILY Protein kinase-like (PK-like) 243 557 IPR011009 -
Stsc151078g00015 586 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Stsc151078g00015 586 Gene3D Phosphorylase Kinase; domain 1 221 334 - -
Stsc151078g00015 586 FunFam Cysteine-rich receptor-like protein kinase 2 6 107 - -
Stsc151078g00015 586 Gene3D Transferase(Phosphotransferase) domain 1 335 547 - -
Stsc151078g00015 586 CDD STKc_IRAK 265 537 - -
Stsc151078g00015 586 ProSiteProfiles Gnk2-homologous domain profile. 6 107 IPR002902 -
Stsc151078g00015 586 FunFam Cysteine-rich receptor-like protein kinase 3 116 217 - -
Stsc151078g00015 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Stsc151078g00015 586 SMART serkin_6 259 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151078g00015 586 FunFam Cysteine-rich receptor-like protein kinase 2 335 543 - -
Stsc151078g00015 586 Pfam Protein kinase domain 260 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151078g00015 586 ProSiteProfiles Protein kinase domain profile. 259 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151078g00015 Stsc-Chr151078 166030 168591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151078g00015 2 586 Receptor kinase-like Gene Family AT1G70520 64.640 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151078g00015 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151078g00015 - - gmx:100305420 966.837