Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151077g00006 ATGATGTTGAGTAGTTCAGCAAAAGCATACCTGTTAATGATAGGGTTGCAATTTGGTATGGCTGGAAATTACATCTTCGGAAAAGACATTCTTAACCACGGAATGAGCCGTTTTGTTTTCATTGTTTATCGCAATGCCTTCGCTGCTGCTGCACTTGCCCCTTTCGCCTTCCTTTTTGAAAGGAAAAGCAGGCCCAAGATGACACTTGCCATCTTTCTTCGGATTATGCTCCTTGGATTTCTTGAGCCGGTTTTCAATCAAAGCTTCACTTACTTGGGAATGAAGTATACTTCGGCTTCATTCACATCTGCAATCATGAATGCCGTCCCATCCATTACCTTTGTTCTTGCAGTTCTTACTCGGATGGAGCATGTAAAAATAAAAGAAGTTCGAAGTCAAGCGAAAGTGATTGGAACCTTAGTAACATTTGGTGGTGCTGTGTTAATGGGAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCTAGAACAGAACATCATCAAGGTGTTAATGGAGAACCTTCCTCATCACACAACCACCAAATCGAAGGAGCTCTTTACATTTTCATGGGTTGTGTGGCTTTATCTTCTTTCTACATTTTACAGACAATCACGGTAAAGAAGTACCCGGCGGAGCTGTCATTGGCGACGCTAATATGCATGGCGGGAACAGGGCAAGCAACGGTGGTGGCACTAGTAGCTGACCATCACTCCCAAGCTTGGGCTATTGGTTGGGATTATAGGCTCTATGCTCCTCTTTATACGGGGTTGGTTAGCTCAGGAATTGCGTACTATGTTCAAGGAATGGTTATGAAAATGAGAGGCCCTGTATTTACAACAGCTTTTAATCCACTTTGTATGATTATTGTTGCTGCTTTGGGTTCCCTCTTATTAGGAGAAAGACTTTATCTTGGAAGCATCATTGGAAGCATCATCATAACAATGGGCCTTTACTCGGTTGTATGGGGCAAATCCAAGGACCATAGAGAGGAATCTGCAGCAGCCAGGGAAGAAACAAATTTAAAATCACTTCCCATTACAGTAACCGATCATGACTCAAAAATTGATGTTATTGGTAATCTGGAAAATTATCCATCAAATGAATCATTGTGA 1113 0.4169 MMLSSSAKAYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAFAAAALAPFAFLFERKSRPKMTLAIFLRIMLLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFVLAVLTRMEHVKIKEVRSQAKVIGTLVTFGGAVLMGIYKGPGFNLFHSRTEHHQGVNGEPSSSHNHQIEGALYIFMGCVALSSFYILQTITVKKYPAELSLATLICMAGTGQATVVALVADHHSQAWAIGWDYRLYAPLYTGLVSSGIAYYVQGMVMKMRGPVFTTAFNPLCMIIVAALGSLLLGERLYLGSIIGSIIITMGLYSVVWGKSKDHREESAAAREETNLKSLPITVTDHDSKIDVIGNLENYPSNESL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151077g00006 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 326 - -
Stsc151077g00006 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Stsc151077g00006 370 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Stsc151077g00006 370 Pfam EamA-like transporter family 8 149 IPR000620 GO:0016020
Stsc151077g00006 370 PANTHER WAT1-RELATED PROTEIN 10 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151077g00006 Stsc-Chr151077 58113 61564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151077g00006 5 338 Nodulin-like Gene Family AT2G37460 48.358 2.79e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151077g00006 - - gmx:100786326 517.694