Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151077g00005 ATGGCAGGAAATTACATCTTTGGCAAAGGTGTGCTTAATCATGGTATCAGTCGTTTTGTGTTCATTTTCTATCGCAATGCCATAGCTGCAATTGTACTTGCTCCCTTTGCATTAATCATTGAAAGGCCGGTTTTCAATCAAAACTTGACGTATCTGGGAATGAAGTACACCTCTGCTTCATTCACATCTGCTATTATGAATGCAGCACCATCAATCACCTTCGTGCTTGCTCTTCTTACCGGGTTGGAGCACGTAAAAATAAGACAAGTTCGGAGCCAAGCAAAAGTGATTGGAACGTTACTAACATTCGGAGGAGCTGTGCTAATGGCACTTTACAAAGGTCCTGGATTCAATCTTTTCCATTCAGCAGCAACACATAACAATGGAGATGTGGGACCCAGCTCACATGATCATCACCATAGTGTTGGAGCTCTTTACATTCTCTTGGGTTGTGTGGGCTTGTCTTCTTTCTACATATTGCAGAGCATAACTATTAAGGAGTATCAAGCAGAGTTATCATTGGCAACATGGATATGCATGTCAGGATCATTGCAAACTGCAATAGTAGCAGTTATTGCAGAGCGTCACTCTGGCTCTAAGGCTTGGGCTGTTGGTTGGGACATAAGGCTCTACGCTCCTCTTTACACGGGAGTGGTTAGTTCAGCAATTGCATACTACATTCAAGGATTGGTTATGAACTTGAAAGGTCCTGTATTCACAACAGCTTTCAATCCTCTTTGCATGGTCATTGTTGCTTCTTTAGGTTCCTTCTTCTTGCGAGAACGACTCTTTCTTGGAAGTATTATTGGAAGCATCATCATCACAATAGGACTTTACTCAGTTTTGTGGGGAAAAGCTAACGATAATGCAAACAAACCCAAAATACAAGCTGATGAGGAGAATACAAGGCCATTGCCAATAACTACTACTGCAGTTGATTCAACCATAAACCAACCATCAAGTTAG 966 0.4172 MAGNYIFGKGVLNHGISRFVFIFYRNAIAAIVLAPFALIIERPVFNQNLTYLGMKYTSASFTSAIMNAAPSITFVLALLTGLEHVKIRQVRSQAKVIGTLLTFGGAVLMALYKGPGFNLFHSAATHNNGDVGPSSHDHHHSVGALYILLGCVGLSSFYILQSITIKEYQAELSLATWICMSGSLQTAIVAVIAERHSGSKAWAVGWDIRLYAPLYTGVVSSAIAYYIQGLVMNLKGPVFTTAFNPLCMVIVASLGSFFLRERLFLGSIIGSIIITIGLYSVLWGKANDNANKPKIQADEENTRPLPITTTAVDSTINQPSS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151077g00005 321 MobiDBLite consensus disorder prediction 302 321 - -
Stsc151077g00005 321 SUPERFAMILY Multidrug resistance efflux transporter EmrE 206 285 - -
Stsc151077g00005 321 SUPERFAMILY Multidrug resistance efflux transporter EmrE 24 114 - -
Stsc151077g00005 321 PANTHER WAT1-RELATED PROTEIN 2 289 IPR030184 GO:0016020|GO:0022857
Stsc151077g00005 321 Pfam EamA-like transporter family 143 282 IPR000620 GO:0016020
Stsc151077g00005 321 MobiDBLite consensus disorder prediction 294 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151077g00005 Stsc-Chr151077 55194 57460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151077g00005 1 304 Nodulin-like Gene Family AT2G37460 43.865 1.01e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151077g00005 - - ahf:112706078 425.631