Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151077g00004 ATGGGAGAAACAGTGTTGAGCAAGGCAAAGCCATATTTGCTAACGGTGGGGCTTCAGTTTGGGTTGGCAGGAACGTACATATTCTCCATGGCGAGTCTCAACCATGGAATGAGTCGTTATGTCTTTGTTGTTTATCGCAATATCATTGCTGCTATTTCCCTCGCTCCTTTTGCTTTCTTTTTCGAAAGGAAGGTTAGGCCAAAGATGACACTATCTGTCTTTATACGGATTCTGGTGCTTGGGCTTCTGGAGCCAGTGATAGACCAAGGATTCACATTCTTAGGGATGCAATACACTTCAGCTTCATTTGCATCTGCCATTATGAATGCTGTCCCATCTGTTACCTTTGTCTTAGCAGTCATTTTCAGGTTAGAGCGGGTAAACGTGAAAGAGGTGCGAAGCCTAGCAAAGGTGATTGGGACATTGGTTACATTTTGTGGCGCATTGGTTATGATTCTCTACAAAGGCCCTGTAATGCACCTTTTTGGTTCTTCTCAAATCCATGATGATCACCACCACCATGATTCAACTCACTCCACTCAGACCCTCACTCATTGGGTCTCAGGAACTCTCTTCCTTTTTCTCGGTTGCGTCGCTTGGTCTTCCTTCTATATTTTACAGTCCATAACGTTGAAAAGTTATCCCGCCGAGATGTCACTGTCATCTTTGATATGCTTGGCGGGTGCTTCGCAAGCTTCCGTGGTGGCCGCGGTGGCAGAGCATCACTCTGGTGCTCGCCCATGGATCATTGGTTGGGACTTTAGGCTCTATGGTCCTCTATATTCGGGTATAGTAAGCTCAGCTATTGCGTATTACGCGCAAGGGTTGGTGTTACAAAGCAAAGGCCCAGTTTTCTTAACGGCATTTAATCCCCTTTGCATGATCATCGTTTCCATATTGGGCTATTTTCTTCTCTCAGAGACTCTTCACCTGGGCAGTATTATTGGGGCCATTATTATCGCAGTGGGTCTTTACTCTGTTGTGTGGGGAAAAGGAAAAGACGGTTCAAACCCCACCACAACAACAACAACGAAGCAAACAGAGTTACATCAACAACTCCCAATTAAGAACACTACTGCCTCAATGTCACAGATTTCCTAA 1101 0.4532 MGETVLSKAKPYLLTVGLQFGLAGTYIFSMASLNHGMSRYVFVVYRNIIAAISLAPFAFFFERKVRPKMTLSVFIRILVLGLLEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVIFRLERVNVKEVRSLAKVIGTLVTFCGALVMILYKGPVMHLFGSSQIHDDHHHHDSTHSTQTLTHWVSGTLFLFLGCVAWSSFYILQSITLKSYPAEMSLSSLICLAGASQASVVAAVAEHHSGARPWIIGWDFRLYGPLYSGIVSSAIAYYAQGLVLQSKGPVFLTAFNPLCMIIVSILGYFLLSETLHLGSIIGAIIIAVGLYSVVWGKGKDGSNPTTTTTTKQTELHQQLPIKNTTASMSQIS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151077g00004 366 Pfam EamA-like transporter family 188 328 IPR000620 GO:0016020
Stsc151077g00004 366 Pfam EamA-like transporter family 13 152 IPR000620 GO:0016020
Stsc151077g00004 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
Stsc151077g00004 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 155 - -
Stsc151077g00004 366 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151077g00004 Stsc-Chr151077 41807 46595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151077g00004 6 334 Nodulin-like Gene Family AT2G37460 50.760 6.13e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151077g00004 - - gmx:100812537 494.967