Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151077g00002 ATGGGTGCGTGGTTGAGAAATGCAAAGCCATATCTGCTTCTTGTGGCGGTGCAATTCGGCTCAGCCGGAATGTTCATATTTGCCATGGATGCAATCCACAAAGGCATGAGTCATTACGTTTTCATTGTCTACCGTAACGCCATCGCTTCCGTTACTCTCGCTCCCTTTGCTTTCCTTCTTGAAAGGAAGGTTAGGCCAAAGATGAGTCTCCGGGTAGTTCTAGAGATTATGGCCTTGGCTTTCTTCGAGATCATACTTGATCAATGTTTCGCCCTGCTAGGGATGAAGTACACATCGGCATCTTTTCTATCTGCCGTGATGAATTCCGCACCTTCCATTACTTTTCTATTGGCCGTCATTCTTAGAATGGAGCGCATGAAGATTAAGGAGGTAGCATGCCAAGCAAAAGTGATTGGCACTGCGGTCACTTTTGGAGGCACCTTAGTTATGGCATTCTACAAAGGCACCGCGGTTACCGTTGTGGGGGCTACCAAGGCGGCCCACCAGGCGGAGACCGTGAACAACTCTTCCGGCGGCAGCCATTGGGCGATAGGGACGTGTTTTCTTCTTATTGGTTGCATCGGCTTCTCTGCCTTTTACATATTGCAGGCTATAACATTGAGGAAGTACCCGGCAGAGATGTCGCTCGCAACATGGGTCTGCTTCGCCGGAGCGCTTCAGAGCTCACTCGTGGCGGTTTTCGCCGAGCGCCACCGTCCTCGTGCATGGGCTCTTGGTTGGGACGTCAGACTCTTTGCTCCCGCATATGCGGGAATAGTAACATCAGGGGTGCAATACTATATACAAGGGATGGTTAGCAAAGCAATGGGCCCTGTAATTGTCACTGCCTTCAATCCACTGCGTATGGTCATTGTTACTGCTTTGGCTTGCATAGTTCTTTCTGAGCAACTCTATCTCGGAAGTATAATTGGAGCAATAGTGGTGGTTGCTGGTCTCTATGCTGTGGTGTGGGGAAAATACAAAGAGCAGAAAGCAAAGGAGAACTTCCATCACCAACAACACCTTCCTGTCATGCCTCTGCCTCTCACAAATAATGACACTAATAGCAAATCCGAATTTGTAGTCATTCAACCTCATCAACAAATATCAACCACAGAAAATCAGACCAATTAA 1134 0.4824 MGAWLRNAKPYLLLVAVQFGSAGMFIFAMDAIHKGMSHYVFIVYRNAIASVTLAPFAFLLERKVRPKMSLRVVLEIMALAFFEIILDQCFALLGMKYTSASFLSAVMNSAPSITFLLAVILRMERMKIKEVACQAKVIGTAVTFGGTLVMAFYKGTAVTVVGATKAAHQAETVNNSSGGSHWAIGTCFLLIGCIGFSAFYILQAITLRKYPAEMSLATWVCFAGALQSSLVAVFAERHRPRAWALGWDVRLFAPAYAGIVTSGVQYYIQGMVSKAMGPVIVTAFNPLRMVIVTALACIVLSEQLYLGSIIGAIVVVAGLYAVVWGKYKEQKAKENFHHQQHLPVMPLPLTNNDTNSKSEFVVIQPHQQISTTENQTN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151077g00002 377 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016020|GO:0022857
Stsc151077g00002 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Stsc151077g00002 377 Pfam EamA-like transporter family 10 149 IPR000620 GO:0016020
Stsc151077g00002 377 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
Stsc151077g00002 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151077g00002 Stsc-Chr151077 13939 16700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151077g00002 5 376 Nodulin-like Gene Family AT2G37460 41.067 5.44e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151077g00002 - - gmx:100820569 535.798