Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151076g00023 ATGAGTTGGAATCCACACATGGAGATCCACCATTACAATAACATCAGCTATCCCTATAGTACAGCAGGAAGCTTTATCGAATATTTTGAAGGTCTCACCTATGAACATGTCAATTTCATCTTTTCTGGTGCATCACATGCTCAGGAGAGTTCATACCCATCAACTACAAACTTTTATAAGTTTGGACTTTCTGAACCTGACAGCACTTCATACTATCGTTATAATCATGGTTATGATGTAAATCACCATCATCATGAACCACTGGTTGACGAATATAGGAGACCTGCAGAAAACTCAACGGCTGTTAATGAACATACAGCTGCTGTAAATACAGAATGGGGAGAAGGAGTAAACAATACCACACGAGACAATTCTATTGAGTGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTTGTTTGGCAAGACAGTATTGATCCTGACAACATGACCTACGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACACAAAGCCGTGGTCTTACCCAAGAGCAGATCTCCATGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCTCAAGGAAGAAGTCTAGGGATGAAAGGTGTGTGATTTGCCAGATGGAGTATAAAAGAGGGGACAAGCGGATTACTTTGCCTTGCTTGCCCTATATGTTACCGGGAAGTATTTTAGCCGACAGAAATAACCTCAGACAAATTCGTAGAAGTAAAACCTGCATATGA 732 0.4057 MSWNPHMEIHHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSTTNFYKFGLSEPDSTSYYRYNHGYDVNHHHHEPLVDEYRRPAENSTAVNEHTAAVNTEWGEGVNNTTRDNSIECPRRHHSNSNDYQVVWQDSIDPDNMTYEELLELGEAVGTQSRGLTQEQISMLPVSKYKCGFFSRKKSRDERCVICQMEYKRGDKRITLPCLPYMLPGSILADRNNLRQIRRSKTCI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151076g00023 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 218 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151076g00023 Stsc-Chr151076 171919 174649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151076g00023 7 217 C3H Transcription Factor Family AT3G63530 40.741 1.65e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151076g00023 K19045 - gmx:100805963 400.208