Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151076g00001 ATGGATCCTAAGATATCAATAGAGGAGCAATTCTCCAAGCTGCATCCTTCATTCCCAGAAAACACAAGAATTGGAATAGTTGGTGGTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTTGCCAGGCTTGGCTATAAGAATGTCACAGTCTTGGAGAAGCATCACACAGTTGGTGGCATGTGTGAATCAGTAGACATTGAAGGAAAAGTTTATGATCTAGGTGGGCAAGTTCTTGCTGCAAGCAGTGCTCCAATCATCTTTCACTTGGCAAAAGAGACAGGCTCAGCACTTGAAGAATTGGACTCTCACAAGCTTGCTACTATCAACCCTTCCAATGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTCATGTCACTTACATTGGAAATTCAGGAAAAGGTGAAGAATTCTGGTAGAATTGGGGTCCATGGAGTGAGTGATATTGCTCCAGAGTTGGCTCCAGAATATCTTGAAAGTCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGTTAAGGTCAAGAACTTAAATGGAGTTGAAACTTTGGTGTTTGATAAGATCATAATCTCTGGTTCATTCCCATTGAAATATGGAAGAACTTATAGATCATTGCCTTCAACTTGCACAGATTGTGAAGAACCTGAAGTAATGGATACAAGTGATCTTGAAAAAGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACCACTGTTTTGAAGATTGATGGACTTGATCATTTGCCTGTTGGATTTTATTACTTCAGTGAATACATGGAGGATCCTAGCACACTTGGACATCCAATCGCAATTCAAAAATTTTATGCAGACACTAACATCTTCTTGCTTTGGTCTTACGGCAACTCTGCGGATATCAAGGGACCTGCTATCACTAAGCTGGCAATCAAGACAGTAGAATCCATGGGGGGAGAAGTTCAGAAAGTCGTTCTTCAACGGCGCTTTAAGTATTTCCCTCATGTTAGCAGCCAAGCTATGAAAGATGGATTCTATGAGAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTAGGTGGCCTAATGGCATTTGAGCTTACAGAGAGGAATTCATCTTATGCCATGGCTCTAATATGCAAGAACTTTGCAAATAGCAACGATTTGCCAATGTTTCCTTATACCAAGAGTTTGTTTCCACTGAGAACTGAGTGCCAAGAAATGGATCCTAGAGAGTTAGGTGAATTGCCAGGAGTGCAGTTTCCTAATTTGCCTAATTTGAATGGCTACTTGAGGCAATGGGGAACTCATCCGGTCACTCAAAACAGAACTCTTTACACTTGGATTAATGAAGAAGGCAAACCAGTAGGCCAGAGGACTTATGCAGAACAACATCTTAATGCATCTTGCATTGCTCATAAACTCTTAACAAGCCAAAAGCCGGTTATCAAGCCCGGTGACAGGGTTCTCCTTGTTTATGTGCCTGGTCTAGACTTCATCGACGCCTTCTTTGGATGTCTAAGAGCTAGAGTCATACCAGTCCCAGTTCTTCCCCCGGATCCAATGCAGAGAAGTGGACAGGCACTAACAAAAATTGAAAACATTACTAAGTCATGTGGCATTGTGGCGATTTTGTCAACAGTTGCTTATCACTCGGCTGTCCGGGCAGGTTCATTGAAAAACTTTATCTCATTAACCGGGAAAAATGGGAAGTCCTCGGCTCGCTGGCCAAATCTTCCATGGCTGCACACTGATACCTGGGTCAAGAATTCCAAAAGTCTGGACTTGAATGGTCTAGATGATCAATGTGAAGAAGCTCAGCCTGGTGATCTTTGTTTCTTGCAATTCACGTCTGGTTCAACTGGTGATGCTAAAGGAGTTATGATCACTCATGGAGGCCTTATTCACAATGTGAAGTTAATGAGAAGTAGATACAGGAGCAGATCAAGGACAGTCCTGGTGAGCTGGCTCCCTCAGTATCATGACATGGGACTAATTGGGGGACTTTTTACATCTCTTGTCAGTGGTGGATCGGCGATTTTGTTTTCGCCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATGAGCAAATATCAAGCAACTCATAGTGCTGGCCCAAACTTTGCATTTGAGTTGGTGATTAGAAGGTTGGAGTCTGACAAAGACAAGCTCCGGAATTTAGACCTTTCATCCATGATTTTTCTTATGGTTGCTGCCGAACCGGTGAGACAAAAGACTCTGAAAAGATTTGTTGAGCTGACTAGTCCCTTTGGATTGTCCGAAAAGGTGATGGCTCCTGGATATGGCTTGGCAGAAAACTGTGTCTTTGTTAGCTGTGCATTCGGGGAACGAAATCCTATCGTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATACTCAACAAGAGAATGCAGATATTGACATAAGAATAGTTGATTCAGAGACATGTGAAGAGCTTCAAGAGGATGGAAAGGAGGGAGAGGTTTGGATTAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCAGAATACTTTCAAGAACAAGCTTCCCAATCATCCTGGTCGTTACTACACAAGAACAGGAGATTTGGGAAGAATCATAGATGGAAAACTATTCATCACTGGAAGAATCAAGGATCTCATCATTGTTGCTGGAAGGAATATCTATTCTGCAGATGTTGAGAAGACAGTTGAGACATCATCAGAATTGCTTCGTCCCGGTTGCTGTGCTGTCATTGGTGTCCCTGAGGAAATCTTATCAGCAAAGGGGATTTCCATGCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAGGTTCGAGATGGCAAACCAGTTGGCATTGATGTTATTGAGAAGATTAGGACTCGTGTGGTTGAAGAACATGGAGTTGTCATTGCTTCTGTCAAGCTGGTTAAGCCTAGAACAATCAGCAAAACAACATCTGGAAAAATCAAGAGATTTGAATGTATCAAGCAGTTTGCAGACGAATCACTGAACTTGGTGCCTCAAGGTCCACAGACTCTATTGAAGAAAAGTTTGCTGAGATCATATACTACCGGAACATGCGGCGAAGGGAATACTCCGAGGCCCCGGCTGGTAAGAAGAACACTTGCAGCTAGCAAAAGGATCAGTAAGAATGATATTGTGGAATTCTTGAAGGGCCTTATTTCTGAGCAGACTGGAATTCCACTCAACAACATCTCAGTTACAGATAACCTCACATCCTATGGAATTGATTCAATTGGTGTGGTTAAAGCAACTCAAAAGCTCTCTCATTTCCTCGGTACACCAGTTGCAGCCATAGATGTTTTCACTGCAACAAACATTCTTGAGTTGGCTAACTTCTCTGATGATCTGATATCCAAAACTCAGCCTCAGCTTTCAAGCAAACCAACCAATGTTCCGGAAGGTGAAACTTTTTCTACTGAACTGCTTGAAGAGGTATCTACGTCTAAGCGATTTGGTATCCATTTACTTCAACTTATGGCACTTATTTATGTTTCCATCATGCTGGCCTCACCAGCTTATATGTGCATCAATGCTTTCCTAAGCTTCATCCCAAGTTTCAGCATATCAGTAGATGGAGTTCCCTGGTCAAATTATTTGGTTTCCCTTGCTTTAGCACCAATTGCTTGGATTCTTTGCATTGCTGCTACTTGCATTTGCATTTCATTATTTGGAAATTCTTTCTTGAGGCCAAACTATGCTCTTGCCTCCGAAATCTCCATGTATTCAATGGACTTCGTTAAGTGGTGGGCATTATATAAGGTCCAAGAGATTTCTTCTAAAGTTCTATCAGTTCACCTCAGAGGAACCGTGTTTCTGAAGTACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTCAGTGTTGCTTGATACGGTTGACATCACCGATCCTAGTCTTGTTTCGATCGGAGATGAAGCTGTCATCGCAGAAGGTGTTTTGGTTCAAAGTCATGATGTAAAAAGTGGAATTCTAAGTCTCCGCCCTATCAAAATTGGGAAAAGTTCCTCAATTGGTCCTTATGCAGTTATTCAAAAAGGGAGTGTTATTGGAGAAGGTGCTGAGGTGCAGGCCTTGCAAAAGGTTGAAGGAGGCCAGCATGTGCCCAAATCTGCCAAGCTTAATAATGTTGATAAGAATGCAGAAGTTCCTAGCATTTACCACTTTATTGGGATCTATCTTGTTGGCTTTCTCAGTTCACTGGCTGCAGCTATTGCCTACTTCATATACATATGGTTCTCCAATAAATCTCCATCATTCCTACACTTCTCATTTGTTTGCATATGTGGTGCATTCCACTGGATCCCCTTCACCATTATTGCATATGCTACCATGTTTTCTGATGTACCATCAAATCCAATAACCTTTGCCATTTCATTTGCCGGCGCCTACTTGCTTCATGGTGTTGTGCTCATCGCTCTCAGCAGCGCTTTCTCTAGCCTCCTCATCATGTCAAGTACAAAGCAAAACCAATATAGAACTTGGCTTAAGCAGCAAATCACCATGTCCTCCCACCTTAGATTCGCAAAGCTTCTCTCAGGAACAGGAGCCTTCTGCGTATATCTACGACTCTTGGGTGCGAAAATTGGCAAGCATTGTTCCATTAGAGCAATCAATCCTGTTTCAAAGCCAGAATTGATGACAATTGGTGATGGTGTCCATCTAGGAGACTTCAGCAAGATAATTACTGGTTTTTACTCTTCCAATGGATATGCTTGTGGAAAGATTGAGGTTCAGGATAATTCAGTTGTTGGGAGTCAAAGCCTGATTCTCCCAGGTTCTCTTGTCCAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAACTCTATACTCCAAGAGGGTGGTGTTTATATCGGATCAAATTCCCAACCTGTTATCAGAAACTCAATGAATAATTCTGATAAAAATAGAGAAGAGATGGACACTGAATGCAAGGAAACCACATTGCTTAAAATGGGCTCAGAAAAAGTTACCTTGACCAGAACATGGTATCAAAGTTTCTCAGTACTCTTCATTCAACCCTTGATGCAAACACTTTTGCCTTATTTTTTGGTTGGTTTATCAGTTTTTGCACCTTTGGACCTTCTTGTTCACCAAAAGAATTCCATGAAACTTTCTTTGCATTGGTTTTTCCCTTTGATTTGGGTTCTCTCTGGTGCTCTAGCTGCATTGGCATGTGTTGTAGCCAAAAGGGTTCTTGTAGGAAAGAACAAATCTGGAGACAAAGTTCCCATATGGAGCATAAGGATCATCATGGACAGCACCTGGCAAGCAATAAGAACACTTATTGGAGACTTTTTCATGGACATGACAAATGGCTCATATTTTCTTGTGCTCTATATGAAGCTGATGGGTGCAGATGTTGAAATGGATCATGAAGTCTATGTGGATAGCAATGGAGCATTGTTGAATCCTGAAATGGTGAAGATTGAGAGAGGTGGCTGTGTGGGAAAAGAAGCATTGCTGTTTGGACACATATATGAAGGTGAAGAAGGAGGAATGGTGAAGTTTGGAGAGATCAAAATTGGAGAAGATGGTTTGGTTGGTAGCAGAGCTATTGCCATGCCTGGTGTGCAGTTGGAGAATGAAGGAAATCTTGGTGCTCTGTCTATTGCCATGAAAGAAGAGATCATAAGGTCAAGGTAA 5691 0.4184 MDPKISIEEQFSKLHPSFPENTRIGIVGGGPSGLSAAYALARLGYKNVTVLEKHHTVGGMCESVDIEGKVYDLGGQVLAASSAPIIFHLAKETGSALEELDSHKLATINPSNGEYQDIKVADDYVSVMSLTLEIQEKVKNSGRIGVHGVSDIAPELAPEYLESHGLKSVPKSVAYVKVKNLNGVETLVFDKIIISGSFPLKYGRTYRSLPSTCTDCEEPEVMDTSDLEKDLFSKVETNDYYTTVLKIDGLDHLPVGFYYFSEYMEDPSTLGHPIAIQKFYADTNIFLLWSYGNSADIKGPAITKLAIKTVESMGGEVQKVVLQRRFKYFPHVSSQAMKDGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSNDLPMFPYTKSLFPLRTECQEMDPRELGELPGVQFPNLPNLNGYLRQWGTHPVTQNRTLYTWINEEGKPVGQRTYAEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRARVIPVPVLPPDPMQRSGQALTKIENITKSCGIVAILSTVAYHSAVRAGSLKNFISLTGKNGKSSARWPNLPWLHTDTWVKNSKSLDLNGLDDQCEEAQPGDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYRSRSRTVLVSWLPQYHDMGLIGGLFTSLVSGGSAILFSPMTFIKKPLLWLETMSKYQATHSAGPNFAFELVIRRLESDKDKLRNLDLSSMIFLMVAAEPVRQKTLKRFVELTSPFGLSEKVMAPGYGLAENCVFVSCAFGERNPIVVDWQGRVCCGYTQQENADIDIRIVDSETCEELQEDGKEGEVWISSPSAGIGYWGREELSQNTFKNKLPNHPGRYYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSELLRPGCCAVIGVPEEILSAKGISMPDGSDQVGLVVIAEVRDGKPVGIDVIEKIRTRVVEEHGVVIASVKLVKPRTISKTTSGKIKRFECIKQFADESLNLVPQGPQTLLKKSLLRSYTTGTCGEGNTPRPRLVRRTLAASKRISKNDIVEFLKGLISEQTGIPLNNISVTDNLTSYGIDSIGVVKATQKLSHFLGTPVAAIDVFTATNILELANFSDDLISKTQPQLSSKPTNVPEGETFSTELLEEVSTSKRFGIHLLQLMALIYVSIMLASPAYMCINAFLSFIPSFSISVDGVPWSNYLVSLALAPIAWILCIAATCICISLFGNSFLRPNYALASEISMYSMDFVKWWALYKVQEISSKVLSVHLRGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEAVIAEGVLVQSHDVKSGILSLRPIKIGKSSSIGPYAVIQKGSVIGEGAEVQALQKVEGGQHVPKSAKLNNVDKNAEVPSIYHFIGIYLVGFLSSLAAAIAYFIYIWFSNKSPSFLHFSFVCICGAFHWIPFTIIAYATMFSDVPSNPITFAISFAGAYLLHGVVLIALSSAFSSLLIMSSTKQNQYRTWLKQQITMSSHLRFAKLLSGTGAFCVYLRLLGAKIGKHCSIRAINPVSKPELMTIGDGVHLGDFSKIITGFYSSNGYACGKIEVQDNSVVGSQSLILPGSLVQKNVILGALSVAPMNSILQEGGVYIGSNSQPVIRNSMNNSDKNREEMDTECKETTLLKMGSEKVTLTRTWYQSFSVLFIQPLMQTLLPYFLVGLSVFAPLDLLVHQKNSMKLSLHWFFPLIWVLSGALAALACVVAKRVLVGKNKSGDKVPIWSIRIIMDSTWQAIRTLIGDFFMDMTNGSYFLVLYMKLMGADVEMDHEVYVDSNGALLNPEMVKIERGGCVGKEALLFGHIYEGEEGGMVKFGEIKIGEDGLVGSRAIAMPGVQLENEGNLGALSIAMKEEIIRSR 1896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151076g00001 1896 SUPERFAMILY Trimeric LpxA-like enzymes 1280 1383 IPR011004 -
Stsc151076g00001 1896 PRINTS Adrenodoxin reductase family signature 23 45 - -
Stsc151076g00001 1896 PRINTS Adrenodoxin reductase family signature 47 60 - -
Stsc151076g00001 1896 Gene3D Hexapeptide repeat proteins 1528 1667 - -
Stsc151076g00001 1896 SUPERFAMILY Trimeric LpxA-like enzymes 1535 1635 IPR011004 -
Stsc151076g00001 1896 Gene3D - 886 1013 IPR045851 -
Stsc151076g00001 1896 SUPERFAMILY Trimeric LpxA-like enzymes 1749 1889 IPR011004 -
Stsc151076g00001 1896 Gene3D Hexapeptide repeat proteins 1271 1384 - -
Stsc151076g00001 1896 Gene3D - 1045 1127 IPR036736 -
Stsc151076g00001 1896 ProSiteProfiles Carrier protein (CP) domain profile. 1056 1130 IPR009081 -
Stsc151076g00001 1896 Pfam AMP-binding enzyme 453 891 IPR000873 -
Stsc151076g00001 1896 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 1645 - -
Stsc151076g00001 1896 CDD FAAL 431 1005 IPR040097 GO:0008610
Stsc151076g00001 1896 Gene3D - 415 885 IPR042099 -
Stsc151076g00001 1896 SUPERFAMILY FAD/NAD(P)-binding domain 20 121 IPR036188 -
Stsc151076g00001 1896 ProSitePatterns Phosphopantetheine attachment site. 1085 1100 IPR006162 -
Stsc151076g00001 1896 SUPERFAMILY ACP-like 1054 1131 IPR036736 -
Stsc151076g00001 1896 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Stsc151076g00001 1896 SUPERFAMILY Acetyl-CoA synthetase-like 430 1009 - -
Stsc151076g00001 1896 Gene3D - 17 140 IPR036188 -
Stsc151076g00001 1896 Gene3D - 309 383 IPR036188 -
Stsc151076g00001 1896 ProSitePatterns Putative AMP-binding domain signature. 613 624 IPR020845 -
Stsc151076g00001 1896 SMART Phosphopantetheine attachment site 1059 1130 IPR020806 GO:0031177
Stsc151076g00001 1896 Pfam Phosphopantetheine attachment site 1061 1125 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151076g00001 Stsc-Chr151076 7661 14472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151076g00001 609 924 Monolignol Biosynthesis Gene Families AT1G20480 26.498 3.17e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151076g00001 - - adu:107477067 3086.98