Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151075g00003 ATGGTGAATCAACTTCCAAACCCAGCTCTTGAAAAGTTTGCAAGGCAACTCCATCTCCATTCTCCTGTTTCCTCCGACAATGGATCCTTGGGCCGCCCCGCTCCATACCAAAGGCGCACATTCGCTAACTACTCCAACGCAGCATTATTGCAGTGTCCAATATTGCCGGCACGCGGCAACTCCACAACTGACTTGTTCAACGTTACAGCGGCCACAAACTCGCCCGTGTTTGTGGCAGCTCCAGCAGAGAAGGGAAACTTCATGATTGACTTCATGATGGGCGGAGTGTCGGCTGCGGTGTCCAAGACCGCGGCTGCTCCGATCGAACGAGTTAAGCTTCTGATCCAAAATCAAGATGAGATGATGAAGCAAGGCAGACTTGCTCAGCCATACAAGGGTATTGGTGACTGCTTTAGTCGAACAATAGCTGATGAGGGTGTGGGTTCTCTTTGGAGAGGTAACACTGCAAATGTCATTCGCTATTTCCCCACTCAGGCTCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATATAGATGGTTACTGGGTATGGTTTGCTGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTCTTGTTTGTATACTCTCTTGACTACGCTCGTACTCGTCTTGCTAATGATGCCAAGGCTGCTAAGAAGGGTGGTGGCGAGAGGCAGTTCAATGGTCTCGTCGACGTCTATAAGAAGACCTTGGCCTCCGACGGTATCGCCGGTCTTTACCGCGGTTTCAACATTTCCTGCGTCGGAATTATTGTCTATCGCGGTCTCTACTTCGGAATGTATGATTCTCTCAAGCCAGTTCTCTTGACTGGATCTTTGCAGGATAGCTTTTTCGCTAGCTTTGCTCTGGGATGGCTCATCACCAATGGTGCAGGTCTTGCATCATACCCAATTGACACTGTTAGGAGAAGAATGATGATGACTTCTGGTGCAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTACACAGATCCTCAAGAATGAGGGTGCCAAGTCCTTGTTCAAGGGTGCTGGTGCTAACATCCTCCGTGCCGTCGCCGGTGCCGGTGTGCTTGCTGGCTATGACAAGTTGCAGGTCATTATGTTTGGCAAGAAGTATGGATCCGGTGGTGCTTAA 1167 0.4961 MVNQLPNPALEKFARQLHLHSPVSSDNGSLGRPAPYQRRTFANYSNAALLQCPILPARGNSTTDLFNVTAATNSPVFVAAPAEKGNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMMKQGRLAQPYKGIGDCFSRTIADEGVGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDIDGYWVWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGERQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGAAVKYKSSMDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMFGKKYGSGGA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151075g00003 388 FunFam ADP,ATP carrier protein, mitochondrial 88 384 - -
Stsc151075g00003 388 Gene3D Mitochondrial carrier domain 88 384 IPR023395 -
Stsc151075g00003 388 PRINTS Adenine nucleotide translocator signature 190 203 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 PRINTS Adenine nucleotide translocator signature 131 152 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 PRINTS Adenine nucleotide translocator signature 164 176 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 PRINTS Adenine nucleotide translocator signature 296 312 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 PRINTS Adenine nucleotide translocator signature 87 99 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 377 IPR018108 -
Stsc151075g00003 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 85 178 IPR018108 -
Stsc151075g00003 388 SUPERFAMILY Mitochondrial carrier 85 373 IPR023395 -
Stsc151075g00003 388 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 76 387 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc151075g00003 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 190 283 IPR018108 -
Stsc151075g00003 388 Pfam Mitochondrial carrier protein 292 378 IPR018108 -
Stsc151075g00003 388 Pfam Mitochondrial carrier protein 86 182 IPR018108 -
Stsc151075g00003 388 Pfam Mitochondrial carrier protein 189 286 IPR018108 -
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 103 117 IPR002067 GO:0055085
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 153 173 IPR002067 GO:0055085
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 90 103 IPR002067 GO:0055085
Stsc151075g00003 388 PRINTS Mitochondrial carrier protein signature 300 322 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151075g00003 Stsc-Chr151075 39365 41382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151075g00003 1 388 Antiporters AT5G13490 80.051 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151075g00003 K05863 - jre:108988027 599.742