Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151073g00028 ATGTTGATGATGAAACTTGTTCTCAACTGGGTTTCTTCTGTTTCTGTTGTTTTGCTTCTGTTCTTGTTGAATGGAGCATTTTCAGCATCATCTTCATCATACACTCCTCCTGACAATTATCTCATTGCCTGTGGTGCCTCAAAAAGCATCACCTTCCAAGGCCGAACCTTTGTTCCTGATTCACAGCATTCTTCACTAGTGTTCAAAACTGGGGATTCTATGGTTGCTGCTAGTTCCAATTCTAGTACTGCACCATCCCCAATTTACCAATCAGCTAGGATCTTCACTGATACAGCTACATATAGATTTGAAATTGCGCAACAGGGTCGGCACTGGATCCGGCTTTACTTTTCGCCTGTTCGGAACTCCGGTCACGATTTGAATTCTGCTTCTGTGACAGTTGTTACTGATAATTTTGTTCTCTTGAGCAATTTCACATTTAGGAGCTACAATGGTTCTTATATGTTCAGGGAGTATGCCATCAATGTTACCTCTGATACCTTAACTATGACCTTTATCCCTTCTAATGGTTCAATTGCCTTTGTCAATGCAATTGAAGTTGTGTCTATGCCTGATGATTTGTTTTTTGATCAAGCATTGGCCCTTAACCCCTCAGCCCCATTCAGCGGCCTCTCTGAACTTGCTTTCGAAACAGTTTACCGGGTGAACATAGGAGGTCCCTTGCTTACTGCCCAAAATGACACCCTTGGAAGGACTTGGGAGAATGATCTGAAGTACCTCCATGTGAACAGCTCAGTCGCTAACGTGTCGGTTGATCCTTCTACCATCAAGTATCCGGCAGGTGTGACGCCTCGGACAGCTCCGAATTGGGTGTATGCCACAGCTGAGGCAATGGGGGATCCAAATGTGGCCAATTCCAATTTCAACATTACTTGGGTCTTCCCTGTGGATCCAAGCTTCTCCTATTTTATCCGGGCACATTTTTGTGATATTATGAGTACGTCATTGAACACTTTAGTGTTCAATATGTTCATAAATTCCGACATAGCTATTGGAAGCCTTGATCTCTCATCCATAACCAATGACTTGGATGTGCCTTACTTTAAGGACTTTGTCTCCAATGCTTCAGACTCTAACACTTTAACAGTAAGTGTTGGTCCTGATACCATGGCAGACCTCACTAATGCTACTATGAATGGATTGGAGATAATGAAAATCAGCAATGCATTGAGGAGCTTGGATGGGCTTTCTTCGGTTGAGAGTCTCCTTCCTAGTTCACAATCAAAGAAGAACAAGACAGGAATTATAGTTGGCTGTGCTTTTGGGGCTTTAGCTGCCATAATATTTGTTGGATTGTGTTGTTATTGCTGCTTGGTAAGATACAAGTCAAAGGATACTCAACAAGGTGGCCATCCATGGCTGCCTTTGCCCTTGTATGGAAACTCTCTGACCATGACAAAAATGTCAACTATCTCGCAAAAAAGCGGAACTGCAAGTTGCATATCTTTGGCTTCCTCAAATCTTGGACGCTTGTTCACTTTCCTAGAAATTCTAGACGCAACCAACAAGTTTGATGAGAAGTTGCTTCTTGGAGTTGGTGGTTTTGGTAGAGTTTACAAGGGAACACTTGATGACGGAACCAATGTAGCTGTTAAGAGAGGCAATCCTAGATCTGAACAAGGTATTGCTGAATTCCGAACAGAAATCGAAATGTTATCCAAGCTTCGCCACCGTCATCTTGTGTCTCTTATTGGTTATTGTGACGAGAGATCAGAGATGATTCTAGTCTATGAATACATGGCTAATGGACCCCTCAGGAGTCACTTGTATGGAACTGACCTGCCACCTCTATCCTGGAAGCAGAGGCTTGAAATCTGCATTGGAGCAGCAAGAGGCCTCCATTACCTCCACACAGGTGCATCTCAAAGCATAATTCACAGGGATGTAAAGACAACAAACATCCTCTTGGATGATAACTTCGTCGCCAAGGTTGCTGATTTCGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAAACTCACGTGAGCACTGCTGTCAAGGGAAGTTTCGGTTATCTTGATCCTGAATACTTCAGGAGACAACAGCTTACAGAGAAATCCGATGTCTATTCTTTTGGAGTAGTTCTAATGGAAGTGTTATGCACAAGGCCGGCTTTGAACCCTGTCCTTCCAAGGGAGCAGGTTAATATAGCCGAGTGGGCAATGACTTGGCAGAAAAAGGGTATGCTTGATCAAATCATGGATCAAAATCTTGTGGGGAAACTCAACCCTGCTTCTCTCAAGAAGTTCGGCGAGACGGCCGAGAAGTGTTTGGCCGAGTATGGCGTGGATAGACCATCTATGGGAGATGTCTTGTGGAACCTTGAATATGCTTTGCAACTCCAAGAGACCTCGTCGGCGCTTATGGAACCGGAAGACAATAGCACTAACCACATTACCGGGATTCAGTTGACTCGTCTCGAACAATTCGACAACAGTGTGAGTATGATGGATGGGGGCATTTCTGGCACAGATGATGATGCAGAAGATGCTGCAACAAGTGCAGTGTTCTCACAGTTGGTAAATCCTCGTGGAAGATGA 2559 0.4412 MLMMKLVLNWVSSVSVVLLLFLLNGAFSASSSSYTPPDNYLIACGASKSITFQGRTFVPDSQHSSLVFKTGDSMVAASSNSSTAPSPIYQSARIFTDTATYRFEIAQQGRHWIRLYFSPVRNSGHDLNSASVTVVTDNFVLLSNFTFRSYNGSYMFREYAINVTSDTLTMTFIPSNGSIAFVNAIEVVSMPDDLFFDQALALNPSAPFSGLSELAFETVYRVNIGGPLLTAQNDTLGRTWENDLKYLHVNSSVANVSVDPSTIKYPAGVTPRTAPNWVYATAEAMGDPNVANSNFNITWVFPVDPSFSYFIRAHFCDIMSTSLNTLVFNMFINSDIAIGSLDLSSITNDLDVPYFKDFVSNASDSNTLTVSVGPDTMADLTNATMNGLEIMKISNALRSLDGLSSVESLLPSSQSKKNKTGIIVGCAFGALAAIIFVGLCCYCCLVRYKSKDTQQGGHPWLPLPLYGNSLTMTKMSTISQKSGTASCISLASSNLGRLFTFLEILDATNKFDEKLLLGVGGFGRVYKGTLDDGTNVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKLNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLEQFDNSVSMMDGGISGTDDDAEDAATSAVFSQLVNPRGR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151073g00028 852 FunFam Receptor-like protein kinase FERONIA 215 395 - -
Stsc151073g00028 852 Gene3D Transferase(Phosphotransferase) domain 1 587 806 - -
Stsc151073g00028 852 ProSiteProfiles Protein kinase domain profile. 511 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151073g00028 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Stsc151073g00028 852 SUPERFAMILY Protein kinase-like (PK-like) 490 782 IPR011009 -
Stsc151073g00028 852 CDD STKc_IRAK 517 782 - -
Stsc151073g00028 852 Gene3D Phosphorylase Kinase; domain 1 471 586 - -
Stsc151073g00028 852 SMART serkin_6 511 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151073g00028 852 FunFam Putative receptor-like protein kinase 39 191 - -
Stsc151073g00028 852 PANTHER OS07G0166700 PROTEIN 497 788 IPR045272 GO:0004714|GO:0006468
Stsc151073g00028 852 Pfam Protein tyrosine and serine/threonine kinase 516 777 IPR001245 GO:0004672|GO:0006468
Stsc151073g00028 852 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Stsc151073g00028 852 Pfam Malectin-like domain 42 393 IPR024788 -
Stsc151073g00028 852 FunFam Receptor-like protein kinase FERONIA 587 803 - -
Stsc151073g00028 852 FunFam receptor-like protein kinase FERONIA 473 586 - -
Stsc151073g00028 852 Gene3D - 39 191 - -
Stsc151073g00028 852 Gene3D - 214 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151073g00028 Stsc-Chr151073 180601 184053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151073g00028 34 852 Receptor kinase-like Gene Family AT3G46290 52.814 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc151073g00028 Malectin_like 1.5e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151073g00028 - - gmx:100809700 1411.36