Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151073g00020 | ATGGAAACTGTGGTTGAGATTCAGGACAGGCATGATGCGGCGAAAGAGATCGAGAAGAGCTTGCTTGAATTGCATCAGGTGTTCTTGGACATGGCAGTTGTGGTGGAGGCTCAAGGGGAGAAGATGGATGACATTGAACACCATGTGATCCATGCTTCTCACTATGTTAAGGATGCTAACAAAGAGCTTGTAACCGCTAACAAGTATCAGAGGAACAACAGGAAGTGGCTCTGCATTGGGATCATCATTCTTCTCATCCTCGTCATTGTCATTCCCATCGCCACAGGGCGAAGCCATGTATAA | 303 | 0.4686 | METVVEIQDRHDAAKEIEKSLLELHQVFLDMAVVVEAQGEKMDDIEHHVIHASHYVKDANKELVTANKYQRNNRKWLCIGIIILLILVIVIPIATGRSHV | 100 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151073g00020 | 100 | Gene3D | - | 1 | 95 | - | - | |
Stsc151073g00020 | 100 | FunFam | Syntaxin 132 | 1 | 95 | - | - | |
Stsc151073g00020 | 100 | Pfam | Syntaxin | 1 | 39 | IPR006011 | GO:0016020 | |
Stsc151073g00020 | 100 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 4 | 66 | IPR000727 | - | |
Stsc151073g00020 | 100 | CDD | SNARE_syntaxin1-like | 3 | 65 | - | - | |
Stsc151073g00020 | 100 | SMART | tSNARE_6 | 1 | 66 | IPR000727 | - | |
Stsc151073g00020 | 100 | SUPERFAMILY | SNARE fusion complex | 5 | 71 | - | - | |
Stsc151073g00020 | 100 | Pfam | SNARE domain | 40 | 91 | IPR000727 | - | |
Stsc151073g00020 | 100 | PANTHER | SYNTAXIN | 6 | 84 | IPR045242 | - | |
Stsc151073g00020 | 100 | ProSitePatterns | Syntaxin / epimorphin family signature. | 10 | 50 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151073g00020 | Stsc-Chr151073 | 135910 | 136212 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151073g00020 | 1 | 78 | SNARE and Associated Proteins | AT1G08560 | 78.205 | 3.79e-40 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151073g00020 | K08486 | - | egr:104426753 | 153.295 |