Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151073g00019 ATGATGACCCCAAGATCTCAGGCGAGGAGCTCCCTCGAGGAGATGCTTGAGTCTCTCCGCCGGAGGGATGAGGAGGAGAAGCCCAAGGACAAGCCACCGGCATTGCCATCGCGGCCCTCCTCGAGGGCCCGGCTGCCGTCGGTGAGAGTGCCTAATAGGTTTGTCTGCCATGGAGATGATAAGAAAGAGGACGGTGGTGTTGGTGGGCGCCATAGAAGGAACGGTAGTTTTGGGGTGAAGAAGGTGAAGGTGCTTGAGGAATCACCTTACATTGTGAAATCAGAAGAAAGCAACAACTTCAACTTGACTGTTGAAGAATTACCATCACCAACATTATCACCTTTATCATCATCACAGCTTCAGGTTTCATCAACCTCTGTTGGTGTTGAACCTCCTGCTCCTGCTTCTGCTACTCCTGCTCCTTCTGATGCATCTGCTCTTGTTTCTGCTGAAGTTTCTGCTTATGTTTCTGCTGTTGGTTCTGCTTCTGCTTCTGCTGTTCCTTCTGTGGTTTGTTCTCCAACAGGGGAAGTGGAATTGGAGGATGATAATATTGCTTATTTCATCAGAAAGAAACTTCATGTTTGGTGTAGGCAACAAAAAGGAAACTGGGAACTAGGAAGGATACAGTCAACTTCGGAAGAGGAAGCATGTGTTTTGCTTTCAAATGGAAATGTTATGAAAGTGTCCAGATTAGCTCTCCTGCCGGCTAATCCGGATATTTTAGAGGGTGTAGATGATCTTATACAGCTTAGTTACTTAAATGAGCCATCGAGTAAGGCAGGGCCAGTTTTAATTGCACTCAATCCCTTCAAAGATGTGCAGATTTATGGAAACGAATATGTAGAAGCTTATAGACAGAGATCTAATGATAATCCTCATGTTTATGCTGTGGCAGATGCAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAATCCATTATCATAAGGTCAGCACCCAATACATTCCTCTTCATATATGTTGCCGAAATCTATGGCATTGAATTTCTGAAGAATGGTGAGAGTGGAGCAGGGAAGACAGAGACAGCAAAAATTGCTATGCAGTATTTAGCTGATCTTGGTGGTGGCAGTTGTGGGATAGAAAATGATGTTCTTCAGACAAATTTTGTACTAGAATCTTTTGGGAATGCAAAAACATCTAGGAATGATAACTCTAGCAGATTTTCAAGAGTTGTTCAACTGGCCAATGGCGAGAGGTCATACCATGTATTTTATCAGCTTTGTGCTGGTTCTTCACCTGATCTTAAAGATAGGCTGAAGCTTAGAGAGGCCAGTGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTAATGATGCTAAAAAGTTTCAAGGGCTAATGAAAGCGTTGGATATTATTCGAATGTCCAAAGAGGATCAAGAAACCGTTTTCAAGATGCTTGCTGCAATATTGTGGCTGGGAAATATTACATTCCATGAAATTGACAATGAAAGTCACATTGAGGTGGTCGACAATGAAGCTGCAACCATTGCTGCCTCACTGATGGAATGCAGTTTGAAGGAGCTAATGGTAACATTGTCTACCCATAAAATTAAAGCTGGCAAGGATACTATTACCAAAAAATTGACGTTGCGACAGGCCATTGATACAAGAGATGCATTAGCAAAATTTATGTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTCAACAAGGCACTTGAAGTGGGTAAAAGGCGTACCGGGAGATCCATAAGTATCCTTGACATTTATGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAGCAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGTCAATGGTGTTGATTGGACAAAAGTAGAGTTTGAGGATAATCAAGTTTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTGCTATCTCTGTTGGATGAGGAATCAAATTTCCCAAGGGCCACTGATCTGACACTTGCTACTAAACTCAAGCAGCACCTCAGTTCTAATCCTTGTTTTAAAGGAGAAAGTGGCAAGGCTTTCAGTGTCCGGCATTATGCAGGGGAGGTTACATATGATACAAATGGCTTTCTGGAGAAGAACCGAGATCCATTGCCATCTGGTTCCATTCAATTGTTGTCATCATGCAGTTGTGAACTGCTGCAGTCATTCTCCCATGTGCTTGATCAGTCTCAACAAACAAACTCCACACACTTAGGTGCTATGGAGTCAAAAAGGCAGAGTGTTGGTACAAAGTTCAAGGGTCAGCTGTTTAGGTTGATGCATCAGATGGAGAGCACTACACCACACTTTATTCGGTGTATAAAGCCGAATTCGAAGCAAGTTCCTGGCATATATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGAGTTTGCCAAGAGGTATGGATTATTGCTTTCTGAGGCGAACACATCCTACGATCCGCTGAGTATCTCTGTTGCTGTTTTGCAAAATTCTAATATCCCCCCAGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGATCAGGACAGGTTGGTGTACTGGAGGATAGGAGAAAACATATTTTACAGGGGATACTTAGTGTTCAGAGAAGTTTTCGTCGTCATCAAGCCCGCAGTACTTTTCGCGAACTCAGGAATGGTGCAACAGTTTTACAATCATTCATTCGCGGAGAAAATGCAAGAAGGAAATATGGTGTTATGATGGAGTCCTCTATAACCATTTCTTCTGAACATGATCAGGCCATGGAGATCGAGGCAGCCACAGTAATACAATCTGCAATTCGCGGGCGTTTGGCTCGGAAGCATGCTAGTAGCCTTTGTAGGCCAAAGAAACATCATGAGAATTCGAGACATAGACGAAGGTCACGTACAAAGTTTCCAGAAGTAAAGGATGTGTTGTCCAGAGAGCTGGCTCAGAACCTGCCTTCAGCTTTAGCAGAACTCCAGAAGCGCGTGGTCAAGGCTGAAGTAACTATAGAGCAAAGAGAAGACGAAAATTCTCAATTGAGGGATCAACTAAAACAGTTTGAGAGAAGGTGGATCGAATACGAGAATAAGATGAAATCAATGGAGGAGATGTGGCAAAGACAAATGTCTTCTCTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCCTCAGAAGCAGCCAGTGGTCAACATGCAAAACTTGATCCCATGACACAGTTTGGCTCTGATTCTGAAGATACTACTTCCATGGAATCTCGAACTCCTCGAACACCTGGCATGAGCACACCCTTGAAGTATTCTAGTAGTCTTTCTGAACTGGGAGCAGTAAGAGAGGTTAATAATGGTTGCACAAATTCTGCAGTCAGCAGTCTGGCAAGAGAATTTGACCAGCAAAGACATGTTTTTGATGAAGAGGCCAGAGCTATGCTTGAGGCTAGATCGGGTAAGAACGGTAATGTGAAATGTTATGATGAATATAAGAAACTTAAACGTAGGTTTAAGGCATGGAAGAAAGAATACAAGATTAGATTAAAGGAGATAAAAGCAAAACTTCATAAGAATCCAGAAACGGATAGAGGCCGGAGAAAATGGTGGGGGAAATTGAGTTCAAAAGCACATTCTCTTGCAAGGGAATAA 3720 0.4255 MMTPRSQARSSLEEMLESLRRRDEEEKPKDKPPALPSRPSSRARLPSVRVPNRFVCHGDDKKEDGGVGGRHRRNGSFGVKKVKVLEESPYIVKSEESNNFNLTVEELPSPTLSPLSSSQLQVSSTSVGVEPPAPASATPAPSDASALVSAEVSAYVSAVGSASASAVPSVVCSPTGEVELEDDNIAYFIRKKLHVWCRQQKGNWELGRIQSTSEEEACVLLSNGNVMKVSRLALLPANPDILEGVDDLIQLSYLNEPSSKAGPVLIALNPFKDVQIYGNEYVEAYRQRSNDNPHVYAVADAAYNEMIRDEVNQSIIIRSAPNTFLFIYVAEIYGIEFLKNGESGAGKTETAKIAMQYLADLGGGSCGIENDVLQTNFVLESFGNAKTSRNDNSSRFSRVVQLANGERSYHVFYQLCAGSSPDLKDRLKLREASEYKYLNQSDCMTIDGVNDAKKFQGLMKALDIIRMSKEDQETVFKMLAAILWLGNITFHEIDNESHIEVVDNEAATIAASLMECSLKELMVTLSTHKIKAGKDTITKKLTLRQAIDTRDALAKFMYANLFDWLVEQVNKALEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEVNGVDWTKVEFEDNQVCLDLFEKKPLGLLSLLDEESNFPRATDLTLATKLKQHLSSNPCFKGESGKAFSVRHYAGEVTYDTNGFLEKNRDPLPSGSIQLLSSCSCELLQSFSHVLDQSQQTNSTHLGAMESKRQSVGTKFKGQLFRLMHQMESTTPHFIRCIKPNSKQVPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFAKRYGLLLSEANTSYDPLSISVAVLQNSNIPPEMYQVGYTKLYLRSGQVGVLEDRRKHILQGILSVQRSFRRHQARSTFRELRNGATVLQSFIRGENARRKYGVMMESSITISSEHDQAMEIEAATVIQSAIRGRLARKHASSLCRPKKHHENSRHRRRSRTKFPEVKDVLSRELAQNLPSALAELQKRVVKAEVTIEQREDENSQLRDQLKQFERRWIEYENKMKSMEEMWQRQMSSLQMSLVAARKSLASEAASGQHAKLDPMTQFGSDSEDTTSMESRTPRTPGMSTPLKYSSSLSELGAVREVNNGCTNSAVSSLAREFDQQRHVFDEEARAMLEARSGKNGNVKCYDEYKKLKRRFKAWKKEYKIRLKEIKAKLHKNPETDRGRRKWWGKLSSKAHSLARE 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151073g00019 1239 Gene3D Kinesin motor domain 739 823 IPR036961 -
Stsc151073g00019 1239 Gene3D Kinesin motor domain 194 441 IPR036961 -
Stsc151073g00019 1239 Gene3D Myosin VI head, motor domain, U50 subdomain 468 599 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 1 74 - -
Stsc151073g00019 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 940 IPR027417 -
Stsc151073g00019 1239 Gene3D - 600 738 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 14 33 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 1214 1239 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 1088 1126 - -
Stsc151073g00019 1239 ProSiteProfiles IQ motif profile. 954 983 IPR000048 GO:0005515
Stsc151073g00019 1239 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 190 239 IPR004009 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 ProSiteProfiles Myosin motor domain profile. 261 890 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 Gene3D - 824 891 - -
Stsc151073g00019 1239 FunFam Unconventional myosin-XIX 595 780 - -
Stsc151073g00019 1239 PANTHER MYOSIN 236 1226 - -
Stsc151073g00019 1239 Pfam Myosin head (motor domain) 397 878 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 Pfam Myosin head (motor domain) 261 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 ProSiteProfiles IQ motif profile. 894 920 IPR000048 GO:0005515
Stsc151073g00019 1239 Gene3D - 896 944 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 972 995 - -
Stsc151073g00019 1239 CDD MYSc_Myo8 259 878 IPR036022 -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 54 70 - -
Stsc151073g00019 1239 Coils Coil 1016 1064 - -
Stsc151073g00019 1239 SMART iq_5 891 913 IPR000048 GO:0005515
Stsc151073g00019 1239 SMART iq_5 953 975 IPR000048 GO:0005515
Stsc151073g00019 1239 SMART iq_5 914 936 IPR000048 GO:0005515
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 972 998 - -
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 109 141 - -
Stsc151073g00019 1239 PRINTS Myosin heavy chain signature 258 277 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 PRINTS Myosin heavy chain signature 377 404 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 PRINTS Myosin heavy chain signature 633 661 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 PRINTS Myosin heavy chain signature 583 611 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 ProSiteProfiles IQ motif profile. 915 944 IPR000048 GO:0005515
Stsc151073g00019 1239 SMART MYSc_2a 237 891 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 1096 1126 - -
Stsc151073g00019 1239 Pfam IQ calmodulin-binding motif 956 973 IPR000048 GO:0005515
Stsc151073g00019 1239 Pfam IQ calmodulin-binding motif 917 935 IPR000048 GO:0005515
Stsc151073g00019 1239 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151073g00019 Stsc-Chr151073 122064 129043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151073g00019 3 1228 Myosins gene family AT5G54280 55.105 0.0 1336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151073g00019 K10357 - gmx:100819335 1595.87