LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151073g00018	ATGGCATCAACATTGTCTAGCACTGTTGTTAAGCCAACACCTTTCCTTGGCCAAGGAAAGGGAACCAACACCAACACTCTCAGAGATGTTGTCTCCATGGGAACTGGGAAATACACCATGGGGAATGAATTGTGGTATGGGCCAGATAGAGTGAAATACTTGGGACCCTTTTCTGCTCAAACGCCTTCATATTTGACTGGAGAGTTCCCTGGAGATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCTGAAGCTTTTGCCAAGAATAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCATTAGGTTGCATCACCCCAGAAGTTCTTGAGAAGTGGGTCAGAGTTGACTTCAAGGAGCCTGTTTGGTTCAAAGCTGGGGCCCAAATCTTCTCAGAGGGTGGGCTTGATTACCTTGGAAACCCAAACCTTGTCCATGCACAAAGCATCCTTGCAGTGTTGGGCTTCCAAGTAGTCCTAATGGGCCTTGTTGAAGGGTTCCGCATCAATGGGCTTCCTGGTGTTGGAGAAGGCAATGACCTCTATCCTGGTGGGCAGTACTTTGACCCATTGGGCCTTGCTGATGACCCAGTTACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGAAGGCTTGCCATGTTCTCAATGTTTGGGTTCTTTGTTCAGGCCATTGTCACTGGTAAAGGCCCACTGGAGAACCTTTTGGACCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCCACCAAGTTTGTGCCTGGTTCTTAG	792	0.4848	MASTLSSTVVKPTPFLGQGKGTNTNTLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS	263

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151073g00018	263	FunFam	Chlorophyll a-b binding protein, chloroplastic	52	256	-	-
	Stsc151073g00018	263	SUPERFAMILY	Chlorophyll a-b binding protein	44	260	-	-
	Stsc151073g00018	263	Pfam	Chlorophyll A-B binding protein	62	229	IPR022796	-
	Stsc151073g00018	263	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	12	262	IPR001344	GO:0009765\|GO:0016020
	Stsc151073g00018	263	Gene3D	Chlorophyll a/b binding protein domain	52	256	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151073g00018	Stsc-Chr151073	120510	121794	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151073g00018	5	262	Chloroplast and Mitochondria Gene Families	AT2G05070	67.790	8.25e-124	351

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151073g00018	K08914		-	qsu:112007400	523.087

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