Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151073g00008 ATGGCCAAGTCTTGTTCTACTAGTGAAAAGAACAATAATGGATTGAAGAAAGGTCCATGGACTCCGGAGGAAGATCAAAAACTCATTGATTACATTCAGAAACATGGACATGGCAAGTGGCGGACCCTTCCTAAGAATGCAGGACTTAAGAGGTGTGGAAAGAGTTGCCGGCTACGTTGGGCTAATTACTTGAGGCCTGATATAAAGAGAGGAAGATTCTCATTTGAAGAAGAAGAAATGATCATCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAATTTGCCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACACACATTAAGAAAAAGTTGCTCAAGATGGGGATTGATCCAGTCACTCATACACCACGCCTTGATGTTCTTCAACTCTCTTCAATTCTAAGCTCAACCTTATTATACAATAACAATAATAATTCACCCCAAATTAATAACAATTATTACCCTAGCCTCTTTGGGATTGGATCATCATCAAGTGTTGCAAATAATCCAAGCCATGTCCTAAGTTTGCTCACATCTCTCTTATCGCCGTATCAAAGCAAAAACAATCACAACGTTTCGAATCAGGTTACTCGAACAGAATTGTCTCCGGCAGAAGATAACGGTGGTGGTTTTAGTCAAAACCAAATTGGTGCCATTGCCATTAGCCCTCAATTTTTGGAAAATCAAATGCAACTTAACCCTAGCCAAGCCTTCCAACCAAACCAACCTTGTGCTAGTAATTTGCATGTGGAGTCCCAAAACATTATGAAATCAAAATTAGAGCCTCAAATCCCTTCAATTTCTACCCCTTTTAGCCACCAAAATACGGTACCAAATTTGTGGCACTATAATAATGGTGGTGGTAACAACATGGTTATTAATAATCGACAAGGTTATTCTTCCTTGGTGGAAAATAATAGTGAAGGGATTATGGCTAATTTGATGAACTCAATGTTATCATCTTCTACAGCTTCATCTTCTAGCCCGAGTAACTTGAATTCATCATCTTCAACGACGTTTGTGAATGGGACGACCAACGAAGATGAAAGGGACAGTTATGGAAGCAACATTTTCATGTATAATATATCAAATGGATTGAATAACTCTGGACTTTTGTCATTACATTGA 1152 0.3845 MAKSCSTSEKNNNGLKKGPWTPEEDQKLIDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEMIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMGIDPVTHTPRLDVLQLSSILSSTLLYNNNNNSPQINNNYYPSLFGIGSSSSVANNPSHVLSLLTSLLSPYQSKNNHNVSNQVTRTELSPAEDNGGGFSQNQIGAIAISPQFLENQMQLNPSQAFQPNQPCASNLHVESQNIMKSKLEPQIPSISTPFSHQNTVPNLWHYNNGGGNNMVINNRQGYSSLVENNSEGIMANLMNSMLSSSTASSSSPSNLNSSSSTTFVNGTTNEDERDSYGSNIFMYNISNGLNNSGLLSLH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151073g00008 383 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Stsc151073g00008 383 MobiDBLite consensus disorder prediction 1 15 - -
Stsc151073g00008 383 SMART sant 16 66 IPR001005 -
Stsc151073g00008 383 SMART sant 69 117 IPR001005 -
Stsc151073g00008 383 MobiDBLite consensus disorder prediction 1 22 - -
Stsc151073g00008 383 Gene3D - 14 70 - -
Stsc151073g00008 383 Gene3D - 72 119 - -
Stsc151073g00008 383 FunFam Transcription factor MYB39 72 133 - -
Stsc151073g00008 383 CDD SANT 72 115 IPR001005 -
Stsc151073g00008 383 CDD SANT 19 64 IPR001005 -
Stsc151073g00008 383 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Stsc151073g00008 383 MobiDBLite consensus disorder prediction 328 356 - -
Stsc151073g00008 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 308 - -
Stsc151073g00008 383 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Stsc151073g00008 383 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Stsc151073g00008 383 FunFam MYB-related transcription factor 16 69 - -
Stsc151073g00008 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Stsc151073g00008 383 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Stsc151073g00008 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151073g00008 Stsc-Chr151073 44133 46126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151073g00008 1 380 MYB Transcription Factor Family AT4G21440 45.692 2.35e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc151073g00008 Myb_DNA-binding 2.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151073g00008 K09422 - gmx:100820398 376.711