Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151073g00003 ATGGCTACTTCATTTCTTCATCTTATGGTCACTGCTAACAACAAGAACCACCATGAAGATCAACAACAACAACCCATCATCATGGATAACAATCCTCTTCTCAGTACTGTCTCTTCTGAAGAAACAACTACAACAAGGATTTCTGCTGAACACATTGGAGGAAGAATCATCAGATCAGGAAGGAACACTAACAAAGGTAGTAGTAGTCGTGTTAATAAACCAAAGAAACCCCCCCAGAGAGGCTTAGGTGTTGAACAGCTTGAAAGGTTAAGAATGCAAGAGTGTTGGAAGAAGATGATGTTGATGAACGACTCTTCTTCTTCTTCTTCTTCTGGGGTTGTTCTTCCAACAACAACAAGTGAGTATTATCATTATCATCATCCTCATCACTACCCTAATAATATGGTAGCTTTTTGTGGTAACAATAATGGTGGTGTTACTATGAAGTTTGGTGGTGCTCCACCAGCAGCAACAAGAAGCCACCATGTCCATGGTGGTGGGTTTCACTTCATCCCTCAACAACAACAAGTTCTTCATGGCAATGCTGTTGGTCACTTCATGGGGACTACTAGAGGTGCCTTATTGAGTGGTGTTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCCTCCTTTGGATCTGTGGCAATGGCGCCACTTTTGAACCCTTTGATTGTTGGAACCCCTTTGGTTGAGACCTCCAGATCAGAGCTCTCTTCAATACCAAATCTGAACCCCCATTTTCAGCCTCTTGATTTTTGCCTTAAGAAAACACGGTTCAATAATGAGGACAATAATGTGAATGTGAATGGATCAAATGCAAGGAAGGAGAGCCCTCTGATTATATGGAACAACAATGGTCCTAATTTTGTTGGATATGAAGCAGTCCCAAACCTTGATGGGGAAGTCATCACTGAGATTACTAAGAATAATAATGAAGCTGCTGCTGCTGATGAGGGTGTGGAAGTTGTTGCTGTTCACAGGAAGGGAAACTCAGTGTGTGGCAGAGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGCCAGAGGCACTTCTTCCAAGGACCTGGAATTTCCCACAATTGCTGCTGCTCCTGAACCTTCCCCTATCACTGCCCCTCCCCCTCCCCCTCCTCCTCCTACTACTACACCCTATAGAAAAGTTCCTCCTCATTCCAATTCCAACAACAACATTGATTTGTCTCTCAAGCTCTCTCGCTAG 1227 0.4303 MATSFLHLMVTANNKNHHEDQQQQPIIMDNNPLLSTVSSEETTTTRISAEHIGGRIIRSGRNTNKGSSSRVNKPKKPPQRGLGVEQLERLRMQECWKKMMLMNDSSSSSSSGVVLPTTTSEYYHYHHPHHYPNNMVAFCGNNNGGVTMKFGGAPPAATRSHHVHGGGFHFIPQQQQVLHGNAVGHFMGTTRGALLSGVSSSSSSPSSSSSSSFGSVAMAPLLNPLIVGTPLVETSRSELSSIPNLNPHFQPLDFCLKKTRFNNEDNNVNVNGSNARKESPLIIWNNNGPNFVGYEAVPNLDGEVITEITKNNNEAAAADEGVEVVAVHRKGNSVCGRVFMEYEFFPGKDARGTSSKDLEFPTIAAAPEPSPITAPPPPPPPPTTTPYRKVPPHSNSNNNIDLSLKLSR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151073g00003 408 MobiDBLite consensus disorder prediction 389 408 - -
Stsc151073g00003 408 PANTHER OS01G0212500 PROTEIN 59 406 IPR040356 GO:0003700
Stsc151073g00003 408 MobiDBLite consensus disorder prediction 361 408 - -
Stsc151073g00003 408 MobiDBLite consensus disorder prediction 368 388 - -
Stsc151073g00003 408 MobiDBLite consensus disorder prediction 60 74 - -
Stsc151073g00003 408 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151073g00003 Stsc-Chr151073 14685 16142 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Stsc151073g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151073g00003 - - aip:107610694 442.58