Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151072g00030 ATGTTTGGAGGGAAGAGAGAGAGAAACTACAAGATGCCGCTCTTTCTCACTCTTCTCTTCCTTATGCTGATGCTTCTTTTCCTCTCCATTCTCTTCTTCTTCTGCAAGCCATGGCGCTTCTTTCTCTCTCTTCCCCCCTCCTCCTCCTCCACCTCCATCAAGGCTAGTGAGCTGGAGAGGCCTCTTCTTTCAGCAGATGGCATTCAGGTTTCATATAATCAGACCAATGATTTTTCCTTAGATTATGATCCTGAAGGTGCTTGCTCTTCCAACCAACTTCATTTTCGCGTCCCTCAAAACCACACAATTGTTCATAAGCAAAGGACTCCTGCCATTTCTCATCCTTCTAATGTGCCTCTAGGTGATAGCTTGGTTTTAGATGTAATTCATGATCATTTGGAAGATGTTGATGCTACTGGTGAAACACTTGAATTTTCCCCGGCTCAATTTGTTGAAACCCAAAAGCATAGCAGACCGAACTTTGAAAATGACAGACTGAAAGTGCCAGGAGATATCTCTGATCAAAGAAGTTCCCTCATGCTGGAGGTTAATGACGGTCCTTCTCGTGGACTCCGTTGTTCTGTACAGTCATCAAATACCTCTCGTCTACCACTAACCTTGGGAAGGGTTTCACCAAGTGATTTGTTGTTAAATGATTCAGAAGTGTCGGGAAAGCATGCTCAAATAAACTGGAATTTGGATAAAATGAAATGGGAATTGGTAGATATGGGTAGCTTAAATGGAACACAGTTGAATTCTCAGCCAATCCACAATGCAAAGACTGGAAGCAGGCATTGGAGTGATCCGGTGGATCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAAAGCAATTGTTCATATTACTAACCAAAATCAGCAGCATATTCCGTTTGGGGTGGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGCAAAAAGCTGCCTATGCAGGATGTTTGTTATTATCAATGGCCTCTGCCTGGGTTGGATCAGTTTGGAGTGTTTGGCATTTGCGATGGGCATGGCGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTCCCCGAGATAATTGCCAATTTATTATCAAATTCATTAGCACGAGAGAGGGTTTTATCACTTCGTGATGCTTCAGAAATTCTTCGAGATGCATTTTCTCAAACAGAAGCAGCCATGAATCACGAGTGTGAGGGATGCACAGCAACAGTGCTTCTGGTGTGGCGTGATGGTGATGAAAATCTTTTTGCACAATGTGCAAATGTTGGAGACTCCACCTGTATCTTATGTATTGATGGCAAACATATTAAGATGACAGAGGATCATAAGATAGCTAATCATTCGGAAAGACTTCGAATTGAAGAGACAGGAGATCCATTGAAAAATGGGGAGAAACGTCTACATGGTATGAAGGAATAA 1428 0.4293 MFGGKRERNYKMPLFLTLLFLMLMLLFLSILFFFCKPWRFFLSLPPSSSSTSIKASELERPLLSADGIQVSYNQTNDFSLDYDPEGACSSNQLHFRVPQNHTIVHKQRTPAISHPSNVPLGDSLVLDVIHDHLEDVDATGETLEFSPAQFVETQKHSRPNFENDRLKVPGDISDQRSSLMLEVNDGPSRGLRCSVQSSNTSRLPLTLGRVSPSDLLLNDSEVSGKHAQINWNLDKMKWELVDMGSLNGTQLNSQPIHNAKTGSRHWSDPVDLANGDIITLGTTSKAIVHITNQNQQHIPFGVGMASDPMALRRGGKKLPMQDVCYYQWPLPGLDQFGVFGICDGHGGDGAAKSASKLFPEIIANLLSNSLARERVLSLRDASEILRDAFSQTEAAMNHECEGCTATVLLVWRDGDENLFAQCANVGDSTCILCIDGKHIKMTEDHKIANHSERLRIEETGDPLKNGEKRLHGMKE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151072g00030 475 Gene3D - 309 474 IPR036457 -
Stsc151072g00030 475 FunFam Protein phosphatase 2C 70 174 308 - -
Stsc151072g00030 475 SMART PP2C_4 295 473 IPR001932 -
Stsc151072g00030 475 SUPERFAMILY SMAD/FHA domain 178 288 IPR008984 GO:0005515
Stsc151072g00030 475 CDD FHA_PP2C70-like 179 289 - -
Stsc151072g00030 475 SMART FHA_2 204 256 IPR000253 GO:0005515
Stsc151072g00030 475 PANTHER PROTEIN PHOSPHATASE 2C 293 461 IPR015655 GO:0004722|GO:0006470
Stsc151072g00030 475 ProSiteProfiles Forkhead-associated (FHA) domain profile. 205 256 IPR000253 GO:0005515
Stsc151072g00030 475 SUPERFAMILY PP2C-like 314 466 IPR036457 -
Stsc151072g00030 475 ProSiteProfiles PPM-type phosphatase domain profile. 301 475 IPR001932 -
Stsc151072g00030 475 Pfam Protein phosphatase 2C 313 473 IPR001932 -
Stsc151072g00030 475 CDD PP2Cc 313 460 IPR001932 -
Stsc151072g00030 475 Pfam FHA domain 206 281 IPR000253 GO:0005515
Stsc151072g00030 475 Gene3D - 173 308 - -
Stsc151072g00030 475 ProSitePatterns PPM-type phosphatase domain signature. 338 346 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151072g00030 Stsc-Chr151072 191293 194292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151072g00030 33 473 PP2C-type Phosphatase Gene Family AT5G19280 51.496 1.68e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151072g00030 K01090 - gmx:100170642 597.816