LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151072g00009	ATGACTTCGCTTTCTGAGCTCGGTTGGCTGCCCTTCACCTTTGAATGCACAAATCATGCGGTTGGGTATATGGTTTTGACTACTTCTGTTGATATCATGGATCATGAAGAGGCTAGGAGAAAGAACATTGGGGTAATTCCGCCGGTAATAGAGGGCAGGAATTCAAAAAAATGGTGGAAAAATTATCGGCAGAAATTTTGGACGGTAATTCCGCCGACCCTCATTTTGGAAGAAACCCTAATCCTCCAACCACGCCGCCAAACGAAGCCCTACCAACCCCTCCTCTCATCTCCTCCTCCTAACCAACCTCTCCTCCACGGTCCGCCACCGTCGCCGAAACCAACCCCACCGAACCTCCCAAACAAAGGCGGCCTCATCTCCGTCGCCGCTAGTCATTCGACAAGGGAGCGTTGGGTAACGGCGGATTCCACCCCGCAGCCACCACCGCCGCGTCCCAGCACTGACCCTAATTTCTCTCTACGGAGCTTCCTTCCCATCGGCGCCGCGTCCAAAAGTCGTGTCATCCACCACCAACCGCCGTATAGTTCTGGTTTCCAAGCACGTCTCTTGTGGTCTCAAGCGACGTCTGAGTCTGCAGACACCGCGTCCTCCGATTTCCAGCCACTGACGACGCTGTCTAGCAGAAACCGCCGCCCTTCGTCTAGCCAAGTCGGTGTTTCTCCTCTTGCCTTTGCTGCTGCTGCAGTGTTGCCGCGCTGGTCATCGCCGCTGGTACAAGTTCTTCAAAGAGTGTTTGGTTGTTCAGTGGTCAAGAAAAGGTGCAGCTACAGTGTTGCTGGTCGTCGCCGCCGGTCAACACCTGAAGACAGAAGTAGTCGTGCGAACTCCATCTCTTTCCCTATGTTCACTTTAGTTCTGTTTACTTTTCAGATGCTTATGTTATTTGTCTTTTACATTTTTACTGTTTCTTTTAGTTTTATGGACAATTTAGCGTCTAATTGTAAAAACAATGTATTAGAATACTGTTTGGATATGTTGTTGGTTAGTTTAAGTTTATCTGAACAGGATATACATTCGATTCGTTATTCTCTGGGGCATGTCAGCATAGAGCAGCGACGGCATGGAGCTTCCCTTCTTCCTCGTGTGTCGCGTTTCTCTTTCTCTCCCTCTTCTCATCTTAGCGACAGCGATAGAGGAAAATTCGGCGGCGGCGGAAAAGCTCGGCGACGCAATGCAGTGTTCACCTCGCCTCTCTTTCTCAACGACGGCGTCGATAGCCACTAA	1245	0.5036	MTSLSELGWLPFTFECTNHAVGYMVLTTSVDIMDHEEARRKNIGVIPPVIEGRNSKKWWKNYRQKFWTVIPPTLILEETLILQPRRQTKPYQPLLSSPPPNQPLLHGPPPSPKPTPPNLPNKGGLISVAASHSTRERWVTADSTPQPPPPRPSTDPNFSLRSFLPIGAASKSRVIHHQPPYSSGFQARLLWSQATSESADTASSDFQPLTTLSSRNRRPSSSQVGVSPLAFAAAAVLPRWSSPLVQVLQRVFGCSVVKKRCSYSVAGRRRRSTPEDRSSRANSISFPMFTLVLFTFQMLMLFVFYIFTVSFSFMDNLASNCKNNVLEYCLDMLLVSLSLSEQDIHSIRYSLGHVSIEQRRHGASLLPRVSRFSFSPSSHLSDSDRGKFGGGGKARRRNAVFTSPLFLNDGVDSH	414

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151072g00009	414	MobiDBLite	consensus disorder prediction	90	159	-	-
	Stsc151072g00009	414	MobiDBLite	consensus disorder prediction	93	119	-	-
	Stsc151072g00009	414	Gene3D	-	16	46	-	-
	Stsc151072g00009	414	MobiDBLite	consensus disorder prediction	374	395	-	-
	Stsc151072g00009	414	MobiDBLite	consensus disorder prediction	200	223	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151072g00009	Stsc-Chr151072	39563	45713	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151072g00009	22	44	Cytoplasmic Ribosomal Protein Gene Family	AT5G59850	82.609	1.26e-06	45.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151072g00009	K02957		-	oeu:111406923	45.4394