Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151071g00002 ATGGGGGAAACAAATTCACGGTCAAATTCGCATAAGCATTGGCGTTTTGGCACGAATTCGCAGCAGAGTATTCAGTTGCGTTCACGTTCGAGTTCGAGATCTTCGTCACCGGAGGAGTCGCCACCAAAGTCTCTCATGGAGAACCTTATGGGCCTTCTTAGGGTTCGAATCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCCTATGTTGTCATCAAGATGGGTAAACAGAAACTCAAGACTCGTGTGATTAAGAGGGATGTTAATCCTGAGTGGAATGAGGACCTCACGCTCTCTATTGTAGATCCAAATACTTCAGTCTCACTGACTATATTTGACCACGATACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAAATCTCAACGTTTATAGAAGCCTTGAAGATGAATGTGACAGGCCTGTCAAATGGTACCGTGGTCAAAAGAATACAACCAAGCCGCGATAACTACCTCGCAGATGAGAGCCGCATCACTTATATCAATGGTAAGCTTGTTCAAGATATGATCCTTAGACTGCGAAATGTGGAATGTGGCGAACTGGAAATCCAGCTAAACTGGATTGATCTTCCTGGGTCCAAGGGTTTATGA 633 0.4518 MGETNSRSNSHKHWRFGTNSQQSIQLRSRSSSRSSSPEESPPKSLMENLMGLLRVRIKRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKRDVNPEWNEDLTLSIVDPNTSVSLTIFDHDTFSKDDKMGDAEFEISTFIEALKMNVTGLSNGTVVKRIQPSRDNYLADESRITYINGKLVQDMILRLRNVECGELEIQLNWIDLPGSKGL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151071g00002 210 Pfam C2 domain 51 138 IPR000008 -
Stsc151071g00002 210 MobiDBLite consensus disorder prediction 11 42 - -
Stsc151071g00002 210 MobiDBLite consensus disorder prediction 1 45 - -
Stsc151071g00002 210 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 47 145 IPR035892 -
Stsc151071g00002 210 CDD C2_ArfGAP 51 193 - -
Stsc151071g00002 210 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 48 208 IPR044562 -
Stsc151071g00002 210 ProSiteProfiles C2 domain profile. 37 148 IPR000008 -
Stsc151071g00002 210 Gene3D C2 domain 46 208 IPR035892 -
Stsc151071g00002 210 SMART C2_3c 52 147 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151071g00002 Stsc-Chr151071 8065 10158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151071g00002 83 210 C2H2 Transcription Factor Family AT1G70790 58.462 6.22e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151071g00002 - - adu:107490639 358.607