Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151070g00032 ATGGAAGACAAAACAATTACGTCCTTTGACCCAAAGAGCGGATTCAACCGCGCTACCAGAACATTCCACAGCCTCAAACCCCCTCTACACCTCCCTCCTCCAAATGCCACCATCTCCGCACCATCATACATTCTCTCTCTCCGCCGCAATTCCCCTTGGTCCGACTCCGTCACCGCCCTCATCGACTCCGCCACCGGCCGCCACCTCTCCTACGCCGAATTCATCCACCGTTCCGAAACCCTAGCTTCCAACCTCGCCTCACTCTTCGCACTCTCCAAATACGACACCGCTTTGATCCTCTCTCCCAACCTCCTCCACGTTCCGATCCTCCACTTCGCGCTCCTCTCCCTCGGCGTCGTTGTTTCGCCCACAAATCCACTCGCCACGCGCTCCGAACTCACTCGCATCATCCGCCTCAGCAAACCGACCATCGCGTTCGCCACGTCAGCAGTGGTTAACAAACTTCCCGATGAGTTCCGTCACGGAACCGTCCTCATCGACTCGCCCGAGTTTGAATCGCTCATAACGGCGAGTCGACCCGGGGCCAAACCGGAACGCGTGGAGGTGAGTCAGTCTGACGTGGCAGCAATTCTTTACTCTTCGGGAACCACAGGGAAGGTGAAGGGAGTGATGCTGACTCATCGGAACCTGACGGCAATGGCAGGTGCATACGACGTCTTTAGGGCGCAGAGGGAGAAGCCTGCGGTGTTCCTCTATACGATGCCGTTTTTCCACGTGTTCGGGTTCACGCTCTCGCTGAGGGCGGTGGTGCTGTTGGAAACGGTGGTGTTGATGGAGAGGTTTGGGTTGAGGAGGGCGGTGGAGGCGATAGAGAGGTTTCGAGTTACGCACATTGCGGGAGTGCCGTCAATGTTGGTGGCGATGATAAAGGACGACGTGACGGCGGCTTATGATTTGAGTTCGTTAGAATGTGTCGCTTGCGGCGGGGCTCCACTGGGAAAGGATACCGCCGCCGCTTTCAAATCGAAGTTTCCCAAAGTGTTAGTCTTACAGGGATACGGTCTAACTGAGTCAACAGCAGGGGTTGCAAGAACATCGAATCCAGAGGAGACAAGTCGATGCAGTACAACAGGTAAGCTGATGCCAGGTGTTGAAGCCAAGATTGTAAATCCACACACAGGCCAACCCATGTTTCCTGCTGAACAAGGGGAGCTCTGGCTCAGAGGACCTTCCATTATGAAAGGTTATGTTGGCGACCCAGAAGCAACTTCAGCAACCTTGGTGGATGGCTGGTTGAAGACTGGGGACCTCTGTTATTTTGATCATGATGGTTTCCTCTATGTCCTTGACAGGTTCAAAGACTTGATCAAATACAAAGGCTACCAGGTGGCCCCTGCAGAATTAGAAGAATTGCTCCATTCACACCTTGAGATAAACGATGCGGCAGTTATTCCATATCCTGATGAAGAAGCAGGTCAAGTCCCCATGGCCTTTGTGGTAAGAAAGCCCCAAAGTTCCCTTCATGAAGCAGAAATAATTGATTTTGTTGCTAAACAGGTTGCACCATACAAGAAAATAAGACGTGTAATATTTGTTGACTCAATACCAAAGAATGCAGCAGGGAAAATTCTAAGGAAAGATTTAAACACAATTGCTCTTGAAAGATCTATCTCTAGGCTATAA 1644 0.5176 MEDKTITSFDPKSGFNRATRTFHSLKPPLHLPPPNATISAPSYILSLRRNSPWSDSVTALIDSATGRHLSYAEFIHRSETLASNLASLFALSKYDTALILSPNLLHVPILHFALLSLGVVVSPTNPLATRSELTRIIRLSKPTIAFATSAVVNKLPDEFRHGTVLIDSPEFESLITASRPGAKPERVEVSQSDVAAILYSSGTTGKVKGVMLTHRNLTAMAGAYDVFRAQREKPAVFLYTMPFFHVFGFTLSLRAVVLLETVVLMERFGLRRAVEAIERFRVTHIAGVPSMLVAMIKDDVTAAYDLSSLECVACGGAPLGKDTAAAFKSKFPKVLVLQGYGLTESTAGVARTSNPEETSRCSTTGKLMPGVEAKIVNPHTGQPMFPAEQGELWLRGPSIMKGYVGDPEATSATLVDGWLKTGDLCYFDHDGFLYVLDRFKDLIKYKGYQVAPAELEELLHSHLEINDAAVIPYPDEEAGQVPMAFVVRKPQSSLHEAEIIDFVAKQVAPYKKIRRVIFVDSIPKNAAGKILRKDLNTIALERSISRL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151070g00032 547 Gene3D - 441 543 IPR045851 -
Stsc151070g00032 547 CDD 4CL 56 535 - -
Stsc151070g00032 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 537 - -
Stsc151070g00032 547 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Stsc151070g00032 547 Gene3D - 33 440 IPR042099 -
Stsc151070g00032 547 Pfam AMP-binding enzyme 57 445 IPR000873 -
Stsc151070g00032 547 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Stsc151070g00032 547 SUPERFAMILY Acetyl-CoA synthetase-like 56 541 - -
Stsc151070g00032 547 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151070g00032 Stsc-Chr151070 181660 185287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151070g00032 9 547 Monolignol Biosynthesis Gene Families AT5G63380 50.543 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151070g00032 K01904 - gmx:100801143 715.687