Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151069g00017 ATGGAGGGAAGTGACACTTACAACAACTCTTCTAACTCTAACTCTCCTACTTCTTCTTGTGCTTCTCTTCCTCCTCCTCCTACGGCGGCCGCGGCGGCGAAGGCGAAAGTGGTTGTGATGAGTCCTTGTGCTGCATGCAAGATCTTGAGGAGAAGATGTGCGGAGAAATGTGTTCTTGCGCCATATTTTCCTCCCACTGAGCCTACCAAGTTCACCATTGCTCATAGGGTCTTTGGTGCTAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAATCACAAAGAGCTGATGCAGTGAGTAGCATGGTATATGAGGCAAGTGCAAGAATAAGGGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAGCTACAAAAGCAAGTGAATGAGCTTAGAGCACAATTGGCAAAAGCACAAGCTGAGGTTGTCACCATGCAGTTACAACAAGCCAATCTTGTTGCCCTAATTTGCATGGAAATGGCTCAACAACAACAAGAATGTCCACAACAACAAGAATTTGAATCATCACCACAACAATCATCAATGGAAGATTTCAATGTTCCAAGTCCCCACCATCACTATCATCAACAAAGTAATAACATCAACTTCTTTGAGGATAACACTAGCCTCAACTCGATGTGGGAGCCTCTTTGGACATGA 660 0.45 MEGSDTYNNSSNSNSPTSSCASLPPPPTAAAAAKAKVVVMSPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELRAQLAKAQAEVVTMQLQQANLVALICMEMAQQQQECPQQQEFESSPQQSSMEDFNVPSPHHHYHQQSNNINFFEDNTSLNSMWEPLWT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151069g00017 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 195 - -
Stsc151069g00017 219 MobiDBLite consensus disorder prediction 168 196 - -
Stsc151069g00017 219 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Stsc151069g00017 219 MobiDBLite consensus disorder prediction 1 23 - -
Stsc151069g00017 219 MobiDBLite consensus disorder prediction 1 19 - -
Stsc151069g00017 219 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Stsc151069g00017 219 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151069g00017 Stsc-Chr151069 136722 138772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151069g00017 38 219 AS2 family AT2G28500 64.550 7.71e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc151069g00017 LOB 5.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151069g00017 - - gmx:100789504 269.626