Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151069g00010 ATGGAACGGCTCCCGCCGATGGATCTTATGCGCTCGGAGAAGATGACGCTGGTCCAACTCATCATTCCCGCCGAGTCCGCTCACCGAGCCGTTACCTATCTCGGCCAACTCGGCCTCCTCCAATTCCGAGACGAACGGTTGAAGATTGCTATGTTGATGCATTTCACTGTTGAAATGAATTTGGTGATGGCAAATGGTGCTTCTCTTTTAAATGCTGAGAAAAGTCCCTTTCAGAGAACGTTTGTTAACCAGGTGAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGGGTAGTATCTTCTGGTCCTACAATGCAGCCAGATATTTACTTGGAAGATTTAGAGATACAACTTGCTGAGCATGAGCATGGGCTAACTGAAACGAACTCTAACAGTGAGAAGCTTCAGCAATCATATAAGGAACTCTTGGAGTTCAAAATTGTAATGCAAAAGGCATGTGCTATTCTATTTTCAAATCATGGCCATGCGGTTTCAGAAGAGAGAGAACTAGAGAATATGAACTCAAAAGGAGATTATGTTGAGACACCATTTATATTTCAACAGGAAACATCAACGGAGCCAGCAAATCAATCTAGTTTAAGATTTATTAGTGGCATAATTTGTAAATCCAAAGTTCTTAGCTTTGAAAGGATTTTGTTTCGGGCTACAAGAGGAAACATGCTGTTCAATCATGAACCAGCTGGTGACAAACTCACTGATCCTATTTCAAATGAGATGATAGAGAAAGAAGTATTTGTTGTGTTTTTCTCCGGGGAGCGATCAAGAACAAAGATTCTGAAAATTTGTGAGGCGTTTGGTGCCCATACTTACCCTGTTCCTGAAGATATAAGTAAACAGAGGCAAATAATTAACGAGGTTTCATCACGTCTTGCTGATATAGAAGCTACTTTGGATGCTGGGAATAGGCACCGGAATAAGGCTCTAGCTTCTGTAGGCGATCATCTTGAAAAATGGATGGACATGGTAAGAAGAGAGAAAGCTGTCTATGATACATTAAATATGTTAAACTTTGATCTCACAAAAAAATGTCTTGTTGGTGAGGGATGGTGCCCTATATCTGCGCAAGCACAGATTCATGAGGCATTGCAACGTGCAACTTTGGATAGCAATTCACAAGTTGGCATAATCTTTCATTCATTGGATGCACTTGAATCTCCACCTACATACTTTAGGACCAACAACTTCACAAGTCCATATCAGGAAATCGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCCGCAGTTTACACATGTATTACATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTTGGATCATTAGTCCTTATAGCATGTGAAAAAAAGCTGAGCGCTCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTAATGTCACTATTTTCAATCTACTGTGGGTTAATCTACAATGAATTTTTCTGTGTTCCTTTTCACATATTTGGAGCGTCGGCTTACAAATGCCGAGATAATACATGCAGTGATGCACATACCGCTGGTTTAATCAAATATCGAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTTAACTCCCTCAAGATGAAGATGTCCATTCTACTTGGTGTGGTGCATATGAACTTAGGAATCATATTAAGTTATTTCAACGCTTGTTTTTTTAATAACTCAATAGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCACAAGCGGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCGTTTGAGAATCTTGGTGAGAATCAGTTATTCTGGGGCCAAGGGGTACTTCAAGTATTTTTGTTACTTTTTGCTCTAATTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTCTACTAAAGAAGCTTCATGATGAGAGATTCCAAGGGCAAGCTTATGGTAAGCTTAATACCACTGAGATGGACCCTGAGGTGGAACCGGATTCAGCTCGGCAACATCACGAGGAATTCAATTTTAGTGAGGTCTTTGTCCACCAAATGATTCACGCCATAGACTTAGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTCATCATTCGGTTAATAGGGCTACTTGTTTTCTCCTTTGCAACTGCCTCTATACTGCTCATGATGGAGAGTCTGAGTGCTTTTCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGCGATGGTTACAAGTTCAAACCTTTTTCCTTTGCCTCCTTAACCGACGATGAATAA 2457 0.4078 MERLPPMDLMRSEKMTLVQLIIPAESAHRAVTYLGQLGLLQFRDERLKIAMLMHFTVEMNLVMANGASLLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVVSSGPTMQPDIYLEDLEIQLAEHEHGLTETNSNSEKLQQSYKELLEFKIVMQKACAILFSNHGHAVSEERELENMNSKGDYVETPFIFQQETSTEPANQSSLRFISGIICKSKVLSFERILFRATRGNMLFNHEPAGDKLTDPISNEMIEKEVFVVFFSGERSRTKILKICEAFGAHTYPVPEDISKQRQIINEVSSRLADIEATLDAGNRHRNKALASVGDHLEKWMDMVRREKAVYDTLNMLNFDLTKKCLVGEGWCPISAQAQIHEALQRATLDSNSQVGIIFHSLDALESPPTYFRTNNFTSPYQEIVDAYGVARYQEANPAVYTCITFPFLFAVMFGDWGHGICLLLGSLVLIACEKKLSAQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFCVPFHIFGASAYKCRDNTCSDAHTAGLIKYRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVVHMNLGIILSYFNACFFNNSIDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFENLGENQLFWGQGVLQVFLLLFALIAVPWMLFPKPFLLKKLHDERFQGQAYGKLNTTEMDPEVEPDSARQHHEEFNFSEVFVHQMIHAIDLAHSELSTVFYEKVLLLAWGYDNLIIRLIGLLVFSFATASILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTDDE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151069g00010 818 PANTHER VACUOLAR PROTON ATPASES 9 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc151069g00010 818 Coils Coil 120 140 - -
Stsc151069g00010 818 PIRSF ATP6V0A1 5 818 IPR026028 GO:0000220|GO:0046961
Stsc151069g00010 818 Pfam V-type ATPase 116kDa subunit family 70 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151069g00010 Stsc-Chr151069 67220 74507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151069g00010 1 812 Primary Pumps ATPases(2) AT2G28520 70.574 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151069g00010 K02154 - gmx:100800799 1322.38