Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151069g00009 ATGGGAAAATCTTACCCTACCGTTAGTGCTGATTACCAGAAGGCCGTTGAGAAGGCGAAGAAGAAGCTCAGAGGCTTCATTGCAGAGAAGCGCTGTGCTCCTTTGATGCTCCGTCTAGCATGGCACTCTGCTGGAACTTTTGATGTGGCTACAAAGAGTGGAGGTCCATTCGGAACCATGAAGCATCCAGCTGAGCTTGCTCATGGCGCCAACGCTGGACTCGACATCGCTGTGAGGCTTTTGGAGCCGATCAAGGAACAGTTCCCTACCTTGAGCTACGCTGACTTTTACCAGTTGGCCGGTGTAGTTGCTGTTGAGGTCACTGGTGGACCTGAAGTTCCATTCCACCCTGGAAGAGAGGACAAGCCTGAGCCACCACCTGAGGGTCGCTTGCCCGATGCCACTAAGGGATCCGACCACTTGAGAGATGTGTTTGGCAAGGCCATGGGACTAAGTGATCAGGATATTGTTGCCCTCTCTGGTGGTCACACCCTTGGAGCTGCCCACAAGGAGCGTTCTGGCTTTGAAGGACCATGGACAAGCAATCCCCTCATCTTTGACAACTCTTACTTCAAGGAGCTTTTGAGTGGTGAGAAGGAAGGACTCCTTCAGTTGCCAAGTGATAAGGCACTCTTGAGTGACCCTGTATTCCGCCCTCTTGTCNNNNNNNNNNTTATTTGGCTATTTGAATCACATTAA 699 0.5064 MGKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDVATKSGGPFGTMKHPAELAHGANAGLDIAVRLLEPIKEQFPTLSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTLGAAHKERSGFEGPWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPVFRPLVXXXXIWLFESH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151069g00009 232 ProSiteProfiles Plant heme peroxidase family profile. 74 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 MobiDBLite consensus disorder prediction 115 137 - -
Stsc151069g00009 232 CDD ascorbate_peroxidase 5 221 - -
Stsc151069g00009 232 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 9 222 IPR044831 GO:0004601|GO:0034599
Stsc151069g00009 232 FunFam Cytosolic ascorbate peroxidase 19 138 - -
Stsc151069g00009 232 FunFam L-ascorbate peroxidase 2 cytosolic 132 225 - -
Stsc151069g00009 232 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Stsc151069g00009 232 MobiDBLite consensus disorder prediction 110 137 - -
Stsc151069g00009 232 SUPERFAMILY Heme-dependent peroxidases 3 222 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Stsc151069g00009 232 Gene3D - 19 131 - -
Stsc151069g00009 232 Gene3D Peroxidase, domain 2 132 221 - -
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 197 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc151069g00009 232 Pfam Peroxidase 20 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151069g00009 Stsc-Chr151069 64023 66415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151069g00009 3 221 Peroxidase AT3G49960 28.839 4.91e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151069g00009 K00434 - gmx:606508 424.091