Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00027 ATGGATGCGAAGGATATACTGGGTTTGCCCAAGAACTCATTCCCAGCTCTGGAGAAGAAATCTCGTCCTCACAAAGAGTCTCACAGAAAGCCCGATGGCATTTCCCGCGAGGTCTATGCTCTCACTGGTGGGCTCCCTCCTCTTATGCCTTCCCTTGATTCTTCTCAACTCAAGAAAAAACCTCCCTCTCACGAAAAGATCACTTGGCAATGGCTTCCTTTCACCAACTCTGCTCGTAAAGATAATCTTCAACTTTACCATTGGGTTCGAGTGGTCAATGGTGTTCCACCTACGGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTTGATGTTGTTAAATACACGGACGAGGAGTATGACAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAAATCAACTGTTTGACTTGTGTGAGAGGTTTGATCTACGATTTATTGTAATAGCTGATAGGTTTCCATCATCTCGTACTGTAGAGGAATTAAAGGATCGATATTATAGCGTATCCCGGGCTATATTGATTGCTAGAGCTTCATCTTCTGGGGATGTTGCAACCCATCCACTTGTTAAGGAACCATATAATGTTTCACAAGAGATTGAACGAAAACGAGCACTATCCATGGTCCTCTCTCAAACAAGGCAACAAGAGCGAAAAGATGAGGAGGTTCTTGTTGAAGCGAAACGGATAGCTGAGTTACGTATGCCTGCTAAGGCTGTCGAAGAGTCCCAGTTGGCTGCATCAAATGCTGGTCCAGAAGTTACAGGGAGGGCTGTCCCTGGTGAAACTGCATCTCCATCAAATAATGCACAACTTCCATCATTCACGTTACCTGATAATGCATCTACTATAGCTTCTCTTCGCATACTTCGTGTATATTTGAGAACGTATGCACTTGACCAAATGGTGCAAGCTACAACCTCATCTGCTGGACCACGGACCGTCAAACGGATTGAACAAACTTTGCTAGATCTTGGGGTGCAATACAAAGAGGGCGAAGGTTCGCCTTTTTGTGATGGATCATACAATGAAGCACCAGGCACACCAAAGGACTGGACATTTATTCCAGACTCCATGAATTTCGGAGGGGAAAGGGTTAGCAAAAAGGACCAAAAGCGCAAGGGACATGGGCATCCATCGTCATCAGGTCATAAAAGACCTAGAAAAAAGGCCTCGGAGTTCTAG 1191 0.45 MDAKDILGLPKNSFPALEKKSRPHKESHRKPDGISREVYALTGGLPPLMPSLDSSQLKKKPPSHEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYDKYLTDPMWTKEETNQLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARASSSGDVATHPLVKEPYNVSQEIERKRALSMVLSQTRQQERKDEEVLVEAKRIAELRMPAKAVEESQLAASNAGPEVTGRAVPGETASPSNNAQLPSFTLPDNASTIASLRILRVYLRTYALDQMVQATTSSAGPRTVKRIEQTLLDLGVQYKEGEGSPFCDGSYNEAPGTPKDWTFIPDSMNFGGERVSKKDQKRKGHGHPSSSGHKRPRKKASEF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00027 396 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Stsc151067g00027 396 MobiDBLite consensus disorder prediction 373 387 - -
Stsc151067g00027 396 MobiDBLite consensus disorder prediction 1 36 - -
Stsc151067g00027 396 Gene3D - 98 185 - -
Stsc151067g00027 396 CDD SANT_DMAP1_like 129 171 - -
Stsc151067g00027 396 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 331 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Stsc151067g00027 396 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Stsc151067g00027 396 SMART sant 125 174 IPR001005 -
Stsc151067g00027 396 MobiDBLite consensus disorder prediction 350 396 - -
Stsc151067g00027 396 MobiDBLite consensus disorder prediction 17 35 - -
Stsc151067g00027 396 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00027 Stsc-Chr151067 124288 128413 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc151067g00027 SANT_DAMP1_like 1.7e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00027 K11324 - gmx:100818926 613.609