Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00017 ATGGAGAAGAAGGAGATGATGATGGGTGTGAAGATGGAAGATGCATCGCTATTCACTTCTTGTTTCAGCAATAACATTAATCCGTTATGGAGCGTCTTTGATTTGTGTGAACAAGCAGAGGACAACAAGGATTCTTTAGGGTTTATGGAGCTACTCGGTGTGCATCAAGACTATGACGCTGCTCCTCCTCCTCCTCCTCCTCCTCTGCTTGCTGATAATAATTCTTTAGTGAAAGATTCAACAGAAGAAGCTACTATTGTGAAAGATTGTCCTTCTAATTCAGAGGTTCTCAGTAGTAATAATAATCACCAACAGCAGCAGCAGCAACCTTCAAAGTCCAGTTCTTCAGCTTCACCTCTTTCATCTTCTGTGTCCACCACTACAGTGGACCAAGCTGCACCATCACCTCAACACGCCGACAAACTGTTGAAGGCGAAGAAGACAAATGGGAAGAAAAGAGAAAGAGAAGCTCGATACGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGTTACAGATGGAGAAAGTACGGGCAAAAAGCTGTGAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTCAAGAAGCGTGTGGAAAGGTCTTTCACTGATCCAACAATCGTCGTCACAACCTATGAAGGTCAACACACACATCCAAGCCCACTTCTCATGCCTCGCTCTTCTTCTTCATCATCAATAATGCCTCAAACCTACTTCTCCCAAAACTATCTACACCCACACCCACACCCACACCAACAACAACTCTTATTCAATTCTTTCCCTTCTCTTCATCATTTTCCTCCTCCTCTTCCTTCTTCTTCTTCAGCTCAGATCTCCAATAATAATGCATTGTTTCCTCTAAGCGACCATGGCCTTCTTCAAGATGTTCTTCCTTCAAACATGTTCAAGCAGGACTCGATAGAAAGATAG 957 0.4368 MEKKEMMMGVKMEDASLFTSCFSNNINPLWSVFDLCEQAEDNKDSLGFMELLGVHQDYDAAPPPPPPPLLADNNSLVKDSTEEATIVKDCPSNSEVLSSNNNHQQQQQQPSKSSSSASPLSSSVSTTTVDQAAPSPQHADKLLKAKKTNGKKREREARYAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPTIVVTTYEGQHTHPSPLLMPRSSSSSSIMPQTYFSQNYLHPHPHPHQQQLLFNSFPSLHHFPPPLPSSSSAQISNNNALFPLSDHGLLQDVLPSNMFKQDSIER 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00017 318 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 256 IPR044810 GO:0003700
Stsc151067g00017 318 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00017 318 MobiDBLite consensus disorder prediction 92 157 - -
Stsc151067g00017 318 SUPERFAMILY WRKY DNA-binding domain 162 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00017 318 Pfam WRKY DNA -binding domain 171 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00017 318 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00017 318 MobiDBLite consensus disorder prediction 92 134 - -
Stsc151067g00017 318 MobiDBLite consensus disorder prediction 140 157 - -
Stsc151067g00017 318 FunFam WRKY transcription factor 57 156 230 - -
Stsc151067g00017 318 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00017 Stsc-Chr151067 89101 90553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151067g00017 31 314 WRKY Transcription Factor Family AT2G47260 40.491 6.54e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151067g00017 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00017 - - ahf:112758162 374.015